RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 DPYSL2Q16555 572 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 KLHL38Q2WGJ6 581 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 FAM78AQ5JUQ0 283 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 SAXO2Q658L1 398 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 PRMT9Q6P2P2 845 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 NUDCD3Q8IVD9 361 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 MTMR9Q96QG7 549 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 RARRES2Q99969 163 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 OSBPL10Q9BXB5 764 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 MRPL37Q9BZE1 423 aaKnown RBP1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 FARSBQ9NSD9 589 aaKnown RBP1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 SMOXQ9NWM0 555 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF586Q9NXT0 402 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 BFARQ9NZS9 450 aa1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 MRPS18BQ9Y676 258 aaKnown RBP1.46□□□□□ -2.18
HMGB1P29-201ENST00000505659 CENPJQ9HC77 1338 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 RP2O75695 350 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 CAPN1P07384 714 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 IQCF3P0C7M6 154 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR56A5P0C7T3 313 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF806P0C7X5 589 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 HSMCR30P0CW71 290 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 AK4P27144 223 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 CDKN2BP42772 138 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 CX3CR1P49238 355 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 RORCP51449 518 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 DUSP3P51452 185 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 CDH4P55283 916 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 PDK4Q16654 411 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 TPD52L1Q16890 204 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 FILIP1LQ4L180 1135 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 SFT2D3Q587I9 215 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 RIPPLY2Q5TAB7 128 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 TMEM225Q6GV28 225 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 NARS2Q96I59 477 aaKnown RBP1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR8B4Q96RC9 309 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF382Q96SR6 550 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 DOK1Q99704 481 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 TIMM29Q9BSF4 260 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 POLE3Q9NRF9 147 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 SIGLEC9Q9Y336 463 aa1.45□□□□□ -2.18
HMGB1P29-201ENST00000505659 SDK2Q58EX2 2172 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 MBLAC1A4D2B0 266 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 ARPC3O15145 178 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 UTS2O95399 124 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 CCNE2O96020 404 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 IL4P05112 153 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 RPA2P15927 270 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 KIR3DL2P43630 455 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 CDKN1BP46527 198 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 SNRNP35Q16560 246 aaKnown RBP1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 DGUOKQ16854 277 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 SPIN3Q5JUX0 258 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 PDZK1Q5T2W1 519 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR4F3Q6IEY1 312 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 UQCC3Q6UW78 93 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 MIR7-3HGQ8N6C7 128 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR5D13Q8NGL4 314 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR2T34Q8NGX1 318 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR4S2Q8NH73 311 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 MAGEE2Q8TD90 523 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 TMEM54Q969K7 222 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 TTC25Q96NG3 672 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 SORT1Q99523 831 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 TPPP3Q9BW30 176 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 SYNDIG1Q9H7V2 258 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 ISYNA1Q9NPH2 558 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 NID2Q14112 1375 aa1.44□□□□□ -2.18
HMGB1P29-201ENST00000505659 A0A1B0GWJ7 208 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 VGLL3A8MV65 326 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 LGALS9O00182 355 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 MGRN1O60291 552 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 GCM2O75603 506 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 OR7A10O76100 309 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 IGHV2-5P01817 119 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 HRH1P35367 487 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 OPRK1P41145 380 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 ATP1B3P54709 279 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 ZNF616Q08AN1 781 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 MAB21L1Q13394 359 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 NADK2Q4G0N4 442 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 SMUG1Q53HV7 270 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 TMEM205Q6UW68 189 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 ENPP6Q6UWR7 440 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 DHDDSQ86SQ9 333 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 VSTM4Q8IW00 320 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 GATSQ8NAP1 163 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 ABHD3Q8WU67 409 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 SENP8Q96LD8 212 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 CCT7Q99832 543 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 RAB33BQ9H082 229 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 RPF2Q9H7B2 306 aaKnown RBP1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 UBE2ZQ9H832 354 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 POLE4Q9NR33 117 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 KIF3AQ9Y496 699 aa1.43□□□□□ -2.18
HMGB1P29-201ENST00000505659 PTPRTO14522 1441 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 SHROOM3Q8TF72 1996 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 FCMRO60667 390 aa1.42□□□□□ -2.18
HMGB1P29-201ENST00000505659 TBX19O60806 448 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms