RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 XKRYO14609 159 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 EI24O14681 340 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 TRMUO75648 421 aaKnown RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 CNOT4O95628 575 aaKnown RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 OSMP13725 252 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 APEHP13798 732 aaKnown RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 ACADSP16219 412 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 IGFBP5P24593 272 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 POU1F1P28069 291 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 NOS3P29474 1203 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 SDHAP31040 664 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ACVR1BP36896 505 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 CSNK1A1P48729 337 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 RAP1BP61224 184 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 RAP1AP62834 184 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 LGALS3BPQ08380 585 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 FAPQ12884 760 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 KRR1Q13601 381 aaKnown RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 DAG1Q14118 895 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 TRIP10Q15642 601 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 FBXL19-AS1Q494R0 122 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ARMC4Q5T2S8 1044 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 KDM4DQ6B0I6 523 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 GPR139Q6DWJ6 353 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 Q6ZT83 130 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 FAM122BQ7Z309 247 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ABHD12BQ7Z5M8 362 aaPredicted RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 WDFY1Q8IWB7 410 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 C20orf196Q8IYI0 205 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ARIH2OSQ8N7S6 290 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 NOXO1Q8NFA2 376 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 OR8D4Q8NGM9 314 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ZNF519Q8TB69 540 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 MAGEE2Q8TD90 523 aaPredicted RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 RASD2Q96D21 266 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 LRR1Q96L50 414 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ERMAPQ96PL5 475 aaPredicted RBP8.84□□□□□ -0.99
NUP54-203ENST00000504173 LINC00470Q9BZP3 86 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 B3GAT2Q9NPZ5 323 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 SLC7A10Q9NS82 523 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ASB6Q9NWX5 421 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 GALNT8Q9NY28 637 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ELOVL5Q9NYP7 299 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 REV1Q9UBZ9 1251 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 MALT1Q9UDY8 824 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ENOPH1Q9UHY7 261 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
NUP54-203ENST00000504173 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
NUP54-203ENST00000504173 CENPBD1B2RD01 187 aa8.83□□□□□ -1
NUP54-203ENST00000504173 SOCS2O14508 198 aa8.83□□□□□ -1
NUP54-203ENST00000504173 IMPA2O14732 288 aa8.83□□□□□ -1
NUP54-203ENST00000504173 ARHGEF9O43307 516 aa8.83□□□□□ -1
NUP54-203ENST00000504173 MITFO75030 526 aaPredicted RBP8.83□□□□□ -1
NUP54-203ENST00000504173 UPK3AO75631 287 aa8.83□□□□□ -1
NUP54-203ENST00000504173 TXNDC12O95881 172 aa8.83□□□□□ -1
NUP54-203ENST00000504173 TP53P04637 393 aaPredicted RBP8.83□□□□□ -1
NUP54-203ENST00000504173 HEXAP06865 529 aa8.83□□□□□ -1
NUP54-203ENST00000504173 PGA4P0DJD7 388 aa8.83□□□□□ -1
NUP54-203ENST00000504173 PGA3P0DJD8 388 aa8.83□□□□□ -1
NUP54-203ENST00000504173 NR2C1P13056 603 aa8.83□□□□□ -1
NUP54-203ENST00000504173 CD79BP40259 229 aa8.83□□□□□ -1
NUP54-203ENST00000504173 PPP2R2BQ00005 443 aa8.83□□□□□ -1
NUP54-203ENST00000504173 ROR2Q01974 943 aaKnown RBP8.83□□□□□ -1
NUP54-203ENST00000504173 RUNX1T1Q06455 604 aa8.83□□□□□ -1
NUP54-203ENST00000504173 CD47Q08722 323 aa8.83□□□□□ -1
NUP54-203ENST00000504173 MESTQ5EB52 335 aa8.83□□□□□ -1
NUP54-203ENST00000504173 C9orf135Q5VTT2 229 aa8.83□□□□□ -1
NUP54-203ENST00000504173 SLC27A4Q6P1M0 643 aa8.83□□□□□ -1
NUP54-203ENST00000504173 ZBTB49Q6ZSB9 765 aa8.83□□□□□ -1
NUP54-203ENST00000504173 Q71RC1 249 aaPredicted RBP8.83□□□□□ -1
NUP54-203ENST00000504173 JAZF1Q86VZ6 243 aa8.83□□□□□ -1
NUP54-203ENST00000504173 CXorf67Q86X51 503 aaPredicted RBP8.83□□□□□ -1
NUP54-203ENST00000504173 GABRG1Q8N1C3 465 aa8.83□□□□□ -1
NUP54-203ENST00000504173 PARP8Q8N3A8 854 aa8.83□□□□□ -1
NUP54-203ENST00000504173 CBR4Q8N4T8 237 aa8.83□□□□□ -1
NUP54-203ENST00000504173 SYT14Q8NB59 555 aa8.83□□□□□ -1
NUP54-203ENST00000504173 OR2T33Q8NG76 320 aa8.83□□□□□ -1
NUP54-203ENST00000504173 OR4Q3Q8NH05 313 aa8.83□□□□□ -1
NUP54-203ENST00000504173 HDAC2Q92769 488 aaKnown RBP8.83□□□□□ -1
NUP54-203ENST00000504173 TMEM54Q969K7 222 aa8.83□□□□□ -1
NUP54-203ENST00000504173 ALG12Q9BV10 488 aa8.83□□□□□ -1
NUP54-203ENST00000504173 ULBP2Q9BZM5 246 aa8.83□□□□□ -1
NUP54-203ENST00000504173 GLTPQ9NZD2 209 aa8.83□□□□□ -1
NUP54-203ENST00000504173 FOXD3Q9UJU5 478 aaPredicted RBP8.83□□□□□ -1
NUP54-203ENST00000504173 BAIAP2Q9UQB8 552 aa8.83□□□□□ -1
NUP54-203ENST00000504173 RRP15Q9Y3B9 282 aaKnown RBP8.83□□□□□ -1
NUP54-203ENST00000504173 CACNA1CQ13936 2221 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ALPK2Q86TB3 2170 aa8.82□□□□□ -1
NUP54-203ENST00000504173 VPS13CQ709C8 3753 aa8.82□□□□□ -1
NUP54-203ENST00000504173 CIB4A0PJX0 185 aa8.82□□□□□ -1
NUP54-203ENST00000504173 H7C1C5 153 aa8.82□□□□□ -1
NUP54-203ENST00000504173 BHLHE40O14503 412 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ARPC3O15145 178 aa8.82□□□□□ -1
NUP54-203ENST00000504173 IDH3BO43837 385 aa8.82□□□□□ -1
NUP54-203ENST00000504173 LYZL6O75951 148 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ALPLP05186 524 aa8.82□□□□□ -1
NUP54-203ENST00000504173 CDH2P19022 906 aaPredicted RBP8.82□□□□□ -1
NUP54-203ENST00000504173 COX5AP20674 150 aa8.82□□□□□ -1
NUP54-203ENST00000504173 IGHV1-2P23083 117 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms