RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 SPIBQ01892 262 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 GFPT1Q06210 699 aaPredicted RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC173Q0VFZ6 552 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 RPA4Q13156 261 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 PDIA5Q14554 519 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ARL6IP1Q15041 203 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 HFEQ30201 348 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC40Q4G0X9 1142 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SLC39A12Q504Y0 691 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 AGKQ53H12 422 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 HCP5Q6MZN7 132 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 FAHD2BQ6P2I3 314 aaPredicted RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 NEK5Q6P3R8 708 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SLC39A4Q6P5W5 647 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 TMEM270Q6UE05 265 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 TMEM184AQ6ZMB5 413 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 TAF8Q7Z7C8 310 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 IQCA1Q86XH1 822 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ARFGAP2Q8N6H7 521 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 GATSQ8NAP1 163 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SPC24Q8NBT2 197 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 STKLD1Q8NE28 680 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 EXOC6Q8TAG9 804 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 RNASE8Q8TDE3 154 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ST7LQ8TDW4 575 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 MRPS31Q92665 395 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 PTP4A1Q93096 173 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ATP6V1E2Q96A05 226 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ADIPOR1Q96A54 375 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SLC25A36Q96CQ1 311 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 VMP1Q96GC9 406 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 FAHD2AQ96GK7 314 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF560Q96MR9 790 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC43Q96MW1 224 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 CITED1Q99966 193 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 DUSP16Q9BY84 665 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 POLR3FQ9H1D9 316 aaPredicted RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SLC25A51Q9H1U9 297 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 C2orf40Q9H1Z8 148 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF385DQ9H6B1 395 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 LPAR2Q9HBW0 351 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 MID1IP1Q9NPA3 183 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 NUDT15Q9NV35 164 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 C1orf123Q9NWV4 160 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 MRPL39Q9NYK5 338 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 RDH8Q9NYR8 311 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF226Q9NYT6 803 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 TREM2Q9NZC2 230 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 NDUFA13Q9P0J0 144 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 KCNN3Q9UGI6 736 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ATP6V1HQ9UI12 483 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 APPL1Q9UKG1 709 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 RNF6Q9Y252 685 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 TDRKHQ9Y2W6 561 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 AP4B1Q9Y6B7 739 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 S4R3C0 116 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SPACA6W5XKT8 324 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 KIAA1107Q9UPP5 1409 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 EML5Q05BV3 1969 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SCN9AQ15858 1988 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 ARAP2Q8WZ64 1704 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 NRXN2Q9P2S2 1712 aa0.35□□□□□ -2.35
SGMS1-205ENST00000498514 SPAG9O60271 1321 aaKnown RBP0.35□□□□□ -2.35
SGMS1-205ENST00000498514 CEMIPQ8WUJ3 1361 aa0.34□□□□□ -2.35
SGMS1-205ENST00000498514 PATJQ8NI35 1801 aa0.34□□□□□ -2.35
SGMS1-205ENST00000498514 IGHV3OR16-13A0A075B7E8 117 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 A0A0G2JRQ6 117 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 A0A0U1RRA0 63 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 A0A1B0GWB2 263 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 SLC9B1P1A6NJY1 282 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 LRRC30A6NM36 301 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 PP2D1A8MPX8 630 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 WASH3PC4AMC7 463 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 E7ESA3 106 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 H0YL77 283 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 DDX39AO00148 427 aaKnown RBP0.34□□□□□ -2.36
SGMS1-205ENST00000498514 HCRTR1O43613 425 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 PRKYO43930 277 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 JAK2O60674 1132 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 SUPT3HO75486 399 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 CXCL14O95715 111 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 ALPPP05187 535 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 ANXA4P09525 319 aaPredicted RBP0.34□□□□□ -2.36
SGMS1-205ENST00000498514 TLX1NBP0CAT3 122 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 CCDC192P0DO97 292 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 RRASP10301 218 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 TDGF1P13385 188 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 HPGDP15428 266 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 TSPAN8P19075 237 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 HLA-DPA1P20036 260 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 PAICSP22234 425 aaKnown RBP0.34□□□□□ -2.36
SGMS1-205ENST00000498514 WARSP23381 471 aaKnown RBP0.34□□□□□ -2.36
SGMS1-205ENST00000498514 AHCYP23526 432 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 CMA1P23946 247 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 PSMA2P25787 234 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 ANXA13P27216 316 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 YWHABP31946 246 aaKnown RBP0.34□□□□□ -2.36
SGMS1-205ENST00000498514 PRDX2P32119 198 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 CD80P33681 288 aa0.34□□□□□ -2.36
SGMS1-205ENST00000498514 ASMTP46597 345 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms