RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MALT1Q9UDY8 824 aa11.99□□□□□ -0.49
CPNE1-227ENST00000498056 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
CPNE1-227ENST00000498056 PRSS37A4D1T9 235 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 DLGAP1O14490 977 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 SURF4O15260 269 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 HMGN1P05114 100 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 PAICSP22234 425 aaKnown RBP11.98□□□□□ -0.49
CPNE1-227ENST00000498056 GGT2P36268 569 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 ASCL1P50553 236 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 ROR2Q01974 943 aaKnown RBP11.98□□□□□ -0.49
CPNE1-227ENST00000498056 FAPQ12884 760 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 SNAPC1Q16533 368 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 ABHD12BQ7Z5M8 362 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-227ENST00000498056 C20orf196Q8IYI0 205 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 ZNF610Q8N9Z0 462 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 PITX2Q99697 317 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 LINC00470Q9BZP3 86 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 GRIP2Q9C0E4 1043 aa11.98□□□□□ -0.49
CPNE1-227ENST00000498056 FOXD3Q9UJU5 478 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-227ENST00000498056 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 A0A1W2PPL8 197 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 SLC22A23A1A5C7 686 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 NKX2-6A6NCS4 301 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CENPBD1B2RD01 187 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 MSTNO14793 375 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 SEC14L2O76054 403 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CGAP01215 116 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CAPGP40121 348 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CDKN2AP42771 156 aaKnown RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 DBPQ10586 325 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CEACAM16Q2WEN9 425 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 SLC25A35Q3KQZ1 300 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 FBXW9Q5XUX1 488 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 DNM1P34Q6PK57 102 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 BEND4Q6ZU67 534 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 LINGO2Q7L985 606 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 ZNF808Q8N4W9 903 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 DHRSXQ8N5I4 330 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 NSMAFQ92636 917 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 TMEM54Q969K7 222 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 HRASLS5Q96KN8 279 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 RBP7Q96R05 134 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 RBM24Q9BX46 236 aaKnown RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 MRPL13Q9BYD1 178 aaKnown RBP11.97□□□□□ -0.49
CPNE1-227ENST00000498056 MED20Q9H944 212 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 CRLF2Q9HC73 371 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 PLSCR4Q9NRQ2 329 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 MYO18BQ8IUG5 2567 aa11.97□□□□□ -0.49
CPNE1-227ENST00000498056 LOC100130705A0A1B0GUX0 176 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 OR6C68A6NDL8 312 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PRR23D1E9PI22 279 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PRKYO43930 277 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 SLC16A7O60669 478 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 RAD51DO75771 328 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 LYZL6O75951 148 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CLIC3O95833 236 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 QDPRP09417 244 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PRR23D2P0DMB1 279 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CTLA4P16410 223 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CENPAP49450 140 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PCYT1AP49585 367 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 ZNF84P51523 738 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 KEAP1Q14145 624 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CDSNQ15517 529 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 C6orf52Q5T4I8 152 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PLBD1Q6P4A8 553 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 Q6ZT83 130 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CXXC5Q7LFL8 322 aaKnown RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 CXorf67Q86X51 503 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 TCEANCQ8N8B7 351 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 PROKR2Q8NFJ6 384 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 FNDC8Q8TC99 324 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 MCHR2Q969V1 340 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 LRR1Q96L50 414 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 FOXN4Q96NZ1 517 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 TSSK2Q96PF2 358 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 SNX18Q96RF0 628 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 APOL4Q9BPW4 351 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 NUAK2Q9H093 628 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 RASSF4Q9H2L5 321 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 GPR35Q9HC97 309 aa11.96□□□□□ -0.49
CPNE1-227ENST00000498056 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 VSX1Q9NZR4 365 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 NDRG4Q9ULP0 352 aaKnown RBP11.96□□□□□ -0.49
CPNE1-227ENST00000498056 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 IGKV1D-43A0A0B4J1Z2 117 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 CIB4A0PJX0 185 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 DHHO43323 396 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 GYPBP06028 91 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 ITGA5P08648 1049 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 CLUP10909 449 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 B4GALT1P15291 398 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 COX5AP20674 150 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms