RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ELP5Q8TE02 316 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 C15orf40Q8WUR7 153 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 NSMAFQ92636 917 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PNPLA2Q96AD5 504 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PELI1Q96FA3 418 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 TRMT61AQ96FX7 289 aaKnown RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 TAAR9Q96RI9 348 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 RASL10BQ96S79 203 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF587Q96SQ5 575 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 CDC6Q99741 560 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 WDR77Q9BQA1 342 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF649Q9BS31 505 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 DDA1Q9BW61 102 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 SLC22A4Q9H015 551 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ABCB9Q9NP78 766 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 HPF1Q9NWY4 346 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ABRACLQ9P1F3 81 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 NCDNQ9UBB6 729 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 GDF2Q9UK05 429 aaPredicted RBP6.25□□□□□ -1.41
USP39-219ENST00000496047 DKKL1Q9UK85 242 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PADI1Q9ULC6 663 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 VDAC3Q9Y277 283 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 B3GALT5Q9Y2C3 310 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 ZNF281Q9Y2X9 895 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 GRIP1Q9Y3R0 1128 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 LOXL2Q9Y4K0 774 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 PCSK5Q92824 1860 aa6.25□□□□□ -1.41
USP39-219ENST00000496047 CCDC187A0A096LP49 1063 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 IGLV3-32A0A0A0MS00 114 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 FUOMA2VDF0 154 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 PRSS37A4D1T9 235 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 CENPXA8MT69 81 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NOTOA8MTQ0 251 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 PLPP3O14495 311 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 LRRTM2O43300 516 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NPIPB7O75200 414 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 KHDRBS3O75525 346 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 OR2J2O76002 312 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 STK17BO94768 372 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 PLGP00747 810 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 TFP02787 698 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 CLEC2LP0C7M8 214 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 SLC2A2P11168 524 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 TGM1P22735 817 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 MST1P26927 711 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 GRNP28799 593 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 CASRP41180 1078 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 CDKN2AP42771 156 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 GUCA1AP43080 201 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 NR4A2P43354 598 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 RIDAP52758 137 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 EFNA3P52797 238 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 CLRN1P58418 232 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ADAM8P78325 824 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ALKBH1Q13686 389 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 TOMM34Q15785 309 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 ACKR1Q16570 336 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 LPAL2Q16609 132 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ZMAT1Q5H9K5 638 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 EEF1A1P5Q5VTE0 462 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 AGAP7PQ5VUJ5 663 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 STEAP3Q658P3 488 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 SFXN4Q6P4A7 337 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 LRRN1Q6UXK5 716 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 RAB11FIP2Q7L804 512 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 KRT77Q7Z794 578 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 CDC20BQ86Y33 519 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ADGRG3Q86Y34 549 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NAXDQ8IW45 347 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 UEVLDQ8IX04 471 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 PM20D2Q8IYS1 436 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 GHDCQ8N2G8 530 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ESX1Q8N693 406 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ZNF676Q8N7Q3 588 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 OR51L1Q8NGJ5 315 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 OR5AK2Q8NH90 309 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ZNF671Q8TAW3 534 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ABHD4Q8TB40 342 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ENKURQ8TC29 256 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 THEM6Q8WUY1 208 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 RNF138Q8WVD3 245 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 GHSRQ92847 366 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 C8orf44Q96CB5 159 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 CMTM3Q96MX0 182 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 RBP7Q96R05 134 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 ATF6BQ99941 703 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NAA11Q9BSU3 229 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 PTDSS2Q9BVG9 487 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 TTTY10Q9BZA0 68 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 BARHL1Q9BZE3 327 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 SRRQ9GZT4 340 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 SYT4Q9H2B2 425 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 TCF7L1Q9HCS4 588 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 SRA1Q9HD15 236 aaKnown RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 VSX1Q9NZR4 365 aaPredicted RBP6.24□□□□□ -1.41
USP39-219ENST00000496047 MED11Q9P086 117 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 PLEKHB1Q9UF11 243 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms