RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 AMBNQ9NP70 447 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 B3GAT2Q9NPZ5 323 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE3C-207ENST00000494532 B9D1Q9UPM9 204 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 RPL36Q9Y3U8 105 aaKnown RBP12.49□□□□□ -0.41
UBE3C-207ENST00000494532 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 FKBP7Q9Y680 259 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
UBE3C-207ENST00000494532 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 DCTN6O00399 190 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 TNFAIP8O95379 198 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 DBTP11182 482 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 CTLA4P16410 223 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 NTF4P34130 210 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 CENPAP49450 140 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 CASP6P55212 293 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 SIRPAP78324 504 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 SLC35D3Q5M8T2 416 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 B3GNT6Q6ZMB0 384 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 C3P1Q6ZMU1 363 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 ZGRF1Q86YA3 2104 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 C20orf196Q8IYI0 205 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 OR6V1Q8N148 313 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 OR51L1Q8NGJ5 315 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 OR6K6Q8NGW6 343 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 DOCK7Q96N67 2140 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 WARS2Q9UGM6 360 aaKnown RBP12.48□□□□□ -0.41
UBE3C-207ENST00000494532 SH3BGRL2Q9UJC5 107 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 TINAGQ9UJW2 476 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 EMC9Q9Y3B6 208 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 TPRKBQ9Y3C4 175 aa12.48□□□□□ -0.41
UBE3C-207ENST00000494532 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 CACNA1BQ00975 2339 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 IGLV1-36A0A0B4J1U3 117 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 KRT33AO76009 404 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 GLCEO94923 617 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 QDPRP09417 244 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 CRHBPP24387 322 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 GSTT1P30711 240 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 TIMP3P35625 211 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 MTNR1AP48039 350 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 TMED1Q13445 227 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 AHSA2Q719I0 299 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ZBTB46Q86UZ6 589 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ZNF540Q8NDQ6 660 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ZNRF4Q8WWF5 429 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 IPCEF1Q8WWN9 437 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 NSMAFQ92636 917 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 GGHQ92820 318 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 KISS1RQ969F8 398 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 TEAD3Q99594 435 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 PSORS1C1Q9UIG5 152 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
UBE3C-207ENST00000494532 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 ALPK2Q86TB3 2170 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 BOD1L1Q8NFC6 3051 aa12.47□□□□□ -0.41
UBE3C-207ENST00000494532 IGKV1D-43A0A0B4J1Z2 117 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 TRGV8A0A0C4DH27 118 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 IRGMA1A4Y4 181 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 PTGES3LE9PB15 166 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 UPK3AO75631 287 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 IL2RAP01589 272 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 HLA-DQA2P01906 255 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 CRHP06850 196 aa12.46□□□□□ -0.41
UBE3C-207ENST00000494532 TMIGD3P0DMS9 266 aaPredicted RBP12.46□□□□□ -0.41
UBE3C-207ENST00000494532 GLI4P10075 376 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms