RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RND2P52198 227 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARHGDIBP52566 201 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPS13P62277 151 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PPIAP62937 165 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SCN1BQ07699 218 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ST3GAL4Q11206 333 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GTF2H2Q13888 395 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GRB14Q14449 540 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MAPK14Q16539 360 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 LBHQ53QV2 105 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF311Q5JNZ3 666 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 KIAA1161Q6NSJ0 714 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GTF2H2CQ6P1K8 395 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 INO80CQ6PI98 192 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARMCX2Q7L311 632 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CTU1Q7Z7A3 348 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 LHFPL1Q86WI0 220 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 KIR2DL5AQ8N109 375 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SYS1Q8N2H4 156 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FBXO39Q8N4B4 442 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PTGR2Q8N8N7 351 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MRPL43Q8N983 215 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPR26Q8NDV2 337 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPATA22Q8NHS9 363 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FANK1Q8TC84 345 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC5A11Q8WWX8 675 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SEPT1Q8WYJ6 367 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM143Q96AN5 459 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM159Q96B96 161 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ELP4Q96EB1 424 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 C1orf147Q96MC9 270 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAIM2Q9BWQ8 316 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 BCL2L14Q9BZR8 327 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 POLR1EQ9GZS1 481 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 DHX35Q9H5Z1 703 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FKRPQ9H9S5 495 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM161AQ9NX61 479 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MRPL15Q9P015 296 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FBXW2Q9UKT8 454 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FOXJ3Q9UPW0 622 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GINS2Q9Y248 185 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 EXOSC1Q9Y3B2 195 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HDGFL3Q9Y3E1 203 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CHTOPQ9Y3Y2 248 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RNF115Q9Y4L5 304 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC5A10A0PJK1 596 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 IRGMA1A4Y4 181 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLEC18AA5D8T8 446 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2W5A6NFC9 320 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 NPIPB15A6NHN6 443 aaPredicted RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 D6RAR5 112 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 HMGN4O00479 90 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 INSIG1O15503 277 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF264O43296 627 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 HUS1O60921 280 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 MT-CYBP00156 380 aaPredicted RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PDYNP01213 254 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRBC1P01850 177 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 TCRBP04435 133 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ABOP16442 354 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 MGMTP16455 207 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PPIBP23284 216 aaKnown RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACADLP28330 430 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCKBRP32239 447 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPX4P36969 197 aaPredicted RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SOX2P48431 317 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PSMD4P55036 377 aaKnown RBP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 HSF2Q03933 536 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SRSF1Q07955 248 aaKnown RBP eCLIP2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 TNFAIP1Q13829 316 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPNMBQ14956 572 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 NTRK2Q16620 822 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 NDUFA9Q16795 377 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF667Q5HYK9 610 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPANXN4Q5MJ08 99 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ASPHD1Q5U4P2 390 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 RGMBQ6NW40 437 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARSKQ6UWY0 536 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 PAMR1Q6UXH9 720 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C9orf47Q6ZRZ4 202 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 C16orf62Q7Z3J2 963 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CTAGE3PQ8IX95 158 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPR65Q8IYL9 337 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 Q8N402 240 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 TBC1D19Q8N5T2 526 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 KRTCAP2Q8N6L1 136 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACOT4Q8N9L9 421 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLEC18CQ8NCF0 446 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF555Q8NEP9 628 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR6C4Q8NGE1 309 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR56A4Q8NGH8 313 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR56B2PQ8NGI1 322 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR4D10Q8NGI6 311 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR10G8Q8NGN5 311 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR6N1Q8NGY5 312 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR56B4Q8NH76 319 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZDHHC12Q96GR4 267 aa2.25□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF668Q96K58 619 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms