RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 KLF2Q9Y5W3 355 aaPredicted RBP6.71□□□□□ -1.34
VEGFA-214ENST00000493786 SLC22A23A1A5C7 686 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 WIPF3A6NGB9 483 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 ZNF99A8MXY4 864 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 PRSS44E7EML9 344 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 RPL36A-HNRNPH2H7BZ11 118 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 H7C1C5 153 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CASQ2O14958 399 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 DHHO43323 396 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 KHDRBS3O75525 346 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 RAD51DO75771 328 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 LYZL6O75951 148 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 FARS2O95363 451 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 IGFBP1P08833 259 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 PPP3CBP16298 524 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 PSMB1P20618 241 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 COX5AP20674 150 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 IGHV1-2P23083 117 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 EDNRAP25101 427 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NTF4P34130 210 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 UGT2B10P36537 528 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CENPAP49450 140 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CDC42P60953 191 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 LCN6P62502 163 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CDK5Q00535 292 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SORDQ00796 357 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 RUNX1T1Q06455 604 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 LGALS3BPQ08380 585 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 PTGES3Q15185 160 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 STK11Q15831 433 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SNAPC1Q16533 368 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CEACAM16Q2WEN9 425 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 ZIK1Q3SY52 487 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SFRP5Q5T4F7 317 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 OGFRL1Q5TC84 451 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NHLRC1Q6VVB1 395 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 GABRG1Q8N1C3 465 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 GALNT4Q8N4A0 578 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 C17orf78Q8N4C9 275 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 ZNF555Q8NEP9 628 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SDR9C7Q8NEX9 313 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 OR4Q3Q8NH05 313 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NSMAFQ92636 917 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 HDAC2Q92769 488 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 MCHR2Q969V1 340 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 MUCL1Q96DR8 90 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 RDH12Q96NR8 316 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SNX18Q96RF0 628 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 KCNK17Q96T54 332 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NMNAT3Q96T66 252 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 FOXB1Q99853 325 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 MED18Q9BUE0 208 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 GABARAPL3Q9BY60 117 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 MRPL13Q9BYD1 178 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SYT4Q9H2B2 425 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 KCNN2Q9H2S1 579 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 TOR3AQ9H497 397 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SLC25A19Q9HC21 320 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 RPRD1BQ9NQG5 326 aaKnown RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 CMC2Q9NRP2 79 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 IMPAD1Q9NX62 359 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 SMPD3Q9NY59 655 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 TVP23BQ9NYZ1 205 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 VSX1Q9NZR4 365 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NKX1-2Q9UD57 310 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 NDRG3Q9UGV2 375 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 TMEFF2Q9UIK5 374 aaPredicted RBP6.7□□□□□ -1.34
VEGFA-214ENST00000493786 HIVEP3Q5T1R4 2406 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 MED12LQ86YW9 2145 aa6.7□□□□□ -1.34
VEGFA-214ENST00000493786 DIDO1Q9BTC0 2240 aaKnown RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 A0A1W2PPL8 197 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 A1L4Q6 167 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 CLEC18AA5D8T8 446 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 TUBAL3A6NHL2 446 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 ZAR1LA6NP61 321 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 PRR23D1E9PI22 279 aaPredicted RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 CASKO14936 926 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 SLC16A7O60669 478 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 SLC2A10O95528 541 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 WNT11O96014 354 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 HLA-DQA2P01906 255 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 TP53P04637 393 aaPredicted RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 ITGA5P08648 1049 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 PRR23D2P0DMB1 279 aaPredicted RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 NPR2P20594 1047 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 CDKN2AP42771 156 aaKnown RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 CAPZA2P47755 286 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 PCYT1AP49585 367 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 UBE2NP61088 152 aaKnown RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 ARF1P84077 181 aaKnown RBP6.69□□□□□ -1.34
VEGFA-214ENST00000493786 FMODQ06828 376 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 SRSF1Q07955 248 aaKnown RBP eCLIP6.69□□□□□ -1.343e-7■□□□□ 10.6
VEGFA-214ENST00000493786 FAM27E3Q08E93 113 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 CDSNQ15517 529 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 HIST3H3Q16695 136 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 C10orf128Q5T292 105 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 SLX4IPQ5VYV7 408 aa6.69□□□□□ -1.34
VEGFA-214ENST00000493786 TMEM236Q5W0B7 351 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms