RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ATRQ13535 2644 aa10.77□□□□□ -0.68
UPF3A-210ENST00000493727 BLOC1S5-TXNDC5H3BN57 136 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 KLF4O43474 513 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 DNPH1O43598 174 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 EIF1BO60739 113 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 AKR7A3O95154 331 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 RCBTB2O95199 551 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 OSMP13725 252 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF26P17031 533 aaPredicted RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 AHCYP23526 432 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 RPL4P36578 427 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 SUCLG1P53597 346 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 CLDN15P56746 228 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 RAC3P60763 192 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 LTBQ06643 244 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 SNTB1Q13884 538 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 ZIK1Q3SY52 487 aaPredicted RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 SLC36A3Q495N2 470 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 ZBED5Q49AG3 693 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 SMARCD3Q6STE5 483 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 PAMR1Q6UXH9 720 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 IZUMO2Q6UXV1 221 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 CD300LDQ6UXZ3 194 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF620Q6ZNG0 422 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 LRRC17Q8N6Y2 441 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 SCAIQ8N9R8 606 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 CPNE4Q96A23 557 aaPredicted RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 PRRG4Q9BZD6 226 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 PIGMQ9H3S5 423 aa10.77□□□□□ -0.69
UPF3A-210ENST00000493727 MRPL39Q9NYK5 338 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 TMEFF2Q9UIK5 374 aaPredicted RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
UPF3A-210ENST00000493727 KDM4EB2RXH2 506 aaPredicted RBP10.76□□□□□ -0.69
UPF3A-210ENST00000493727 FTCDNL1E5RQL4 147 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 C11orf98E9PRG8 122 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 RNF13O43567 381 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SERPINI2O75830 405 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 NDUFB2O95178 105 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 RAF1P04049 648 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ADORA3P0DMS8 318 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ENPP1P22413 925 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SLC6A6P31641 620 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 AQP2P41181 271 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 AQP4P55087 323 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 PRPS1P60891 318 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 CTU2Q2VPK5 515 aaKnown RBP10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ANKDD1AQ495B1 522 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 CLEC12AQ5QGZ9 265 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 PAQR6Q6TCH4 344 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 H1FNTQ75WM6 255 aaPredicted RBP10.76□□□□□ -0.69
UPF3A-210ENST00000493727 BIVMQ86UB2 503 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 KRTAP1-3Q8IUG1 177 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 C9orf106Q8NAJ2 232 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF555Q8NEP9 628 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 WFDC11Q8NEX6 87 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 CYGBQ8WWM9 190 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 LIPHQ8WWY8 451 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF845Q96IR2 970 aaPredicted RBP10.76□□□□□ -0.69
UPF3A-210ENST00000493727 ADGRG7Q96K78 797 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SAMD8Q96LT4 415 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 RDH12Q96NR8 316 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 DACH2Q96NX9 599 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 TNFRSF13CQ96RJ3 184 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SMR3AQ99954 134 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 TUBA1CQ9BQE3 449 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 RBM24Q9BX46 236 aaKnown RBP10.76□□□□□ -0.69
UPF3A-210ENST00000493727 TEX12Q9BXU0 123 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SRXN1Q9BYN0 137 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 OR52D1Q9H346 318 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 TOR3AQ9H497 397 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 EGLN3Q9H6Z9 239 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 SEC14L4Q9UDX3 406 aa10.76□□□□□ -0.69
UPF3A-210ENST00000493727 IGHV3-15A0A0B4J1V0 119 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 CLCA1A8K7I4 914 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 SNAP29O95721 258 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 CRHP06850 196 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 IGFBP1P08833 259 aaPredicted RBP10.75□□□□□ -0.69
UPF3A-210ENST00000493727 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
UPF3A-210ENST00000493727 GIPRP48546 466 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 HSPA13P48723 471 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 ESRRGP62508 458 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 PUDPQ08623 228 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 TOP3AQ13472 1001 aaPredicted RBP10.75□□□□□ -0.69
UPF3A-210ENST00000493727 C1DQ13901 141 aaKnown RBP10.75□□□□□ -0.69
UPF3A-210ENST00000493727 KEAP1Q14145 624 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF239Q16600 458 aaKnown RBP10.75□□□□□ -0.69
UPF3A-210ENST00000493727 TMEM225Q6GV28 225 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 P4HA3Q7Z4N8 544 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 ADGRE4PQ86SQ3 457 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 GPAT4Q86UL3 456 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 IGFN1Q86VF2 1251 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 CLDN22Q8N7P3 220 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 TMEM99Q8N816 258 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 ADPRHL1Q8NDY3 354 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 MOSPD2Q8NHP6 518 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 UBE2FQ969M7 185 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms