RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 WFDC11Q8NEX6 87 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 OR4F15Q8NGB8 312 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 OR52J3Q8NH60 311 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 FNDC8Q8TC99 324 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 SLC7A13Q8TCU3 470 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 ASB10Q8WXI3 467 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 MCHR2Q969V1 340 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 C7orf34Q96L11 122 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 RBP7Q96R05 134 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF347Q96SE7 839 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 BDH2Q9BUT1 245 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 TRAF4Q9BUZ4 470 aaPredicted RBP6.08□□□□□ -1.44
TOP3A-207ENST00000493648 MRPL13Q9BYD1 178 aaKnown RBP6.08□□□□□ -1.44
TOP3A-207ENST00000493648 C1orf21Q9H246 121 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 KCNN2Q9H2S1 579 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 NELFAQ9H3P2 528 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 MUC13Q9H3R2 512 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 CBLN4Q9NTU7 201 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 B3GNT2Q9NY97 397 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 ACTR3BQ9P1U1 418 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 FBXL3Q9UKT7 428 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF346Q9UL40 294 aaKnown RBP6.08□□□□□ -1.44
TOP3A-207ENST00000493648 PRPF19Q9UMS4 504 aaKnown RBP6.08□□□□□ -1.44
TOP3A-207ENST00000493648 MOKQ9UQ07 419 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 AURKCQ9UQB9 309 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 PMF1-BGLAPU3KQ54 211 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 V9GYQ6 96 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 CADP27708 2225 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 ROS1P08922 2347 aa6.08□□□□□ -1.44
TOP3A-207ENST00000493648 MED13LQ71F56 2210 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TRAV27A0A087WT01 109 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 A6NIZ1 184 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ATP6V1G2-DDX39BF2Z307 99 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 KRT36O76013 467 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 DIRAS1O95057 198 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 GADD45GO95257 159 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RAB36O95755 333 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 IGKV3-15P01624 115 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 IGLV1-44P01699 117 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 CD8AP01732 235 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 HLA-HP01893 362 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 CECR9P0C854 216 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 T-ENOLP0DO92 83 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 B4GALT1P15291 398 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 NPR2P20594 1047 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 FUT4P22083 530 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ACVR1BP36896 505 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 IFNGR2P38484 337 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 CDKN1AP38936 164 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 PTDSS1P48651 473 aaKnown RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 IDH3GP51553 393 aaPredicted RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RAP1BP61224 184 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RAB1AP62820 205 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RAP1AP62834 184 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 VLDLRP98155 873 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 MYBPC1Q00872 1141 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RUNX1T1Q06455 604 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TOP3AQ13472 1001 aaPredicted RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TRIM25Q14258 630 aaKnown RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ETFDHQ16134 617 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 SLC36A2Q495M3 483 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 NRN1LQ496H8 165 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 MTX3Q5HYI7 312 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 THEM4Q5T1C6 240 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ARMC4Q5T2S8 1044 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TMEM53Q6P2H8 277 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 CYP2R1Q6VVX0 501 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TRPM8Q7Z2W7 1104 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 DTX2Q86UW9 622 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 MDP1Q86V88 176 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 DHFR2Q86XF0 187 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 MEX3DQ86XN8 651 aaKnown RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ZDHHC21Q8IVQ6 265 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 FAM86B1Q8N7N1 296 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 SYT14Q8NB59 555 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 NOXO1Q8NFA2 376 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 LRGUKQ96M69 825 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 Q96MF0 132 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 SEPHS2Q99611 448 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 RNF121Q9H920 327 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 SMURF2Q9HAU4 748 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 BARX1Q9HBU1 254 aaPredicted RBP6.07□□□□□ -1.44
TOP3A-207ENST00000493648 IL1RAPQ9NPH3 570 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TMEM38BQ9NVV0 291 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 GRHPRQ9UBQ7 328 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TMCC3Q9ULS5 477 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 SPEF1Q9Y4P9 236 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 ARID1AO14497 2285 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
TOP3A-207ENST00000493648 TRBV4-1A0A0J9YWV2 114 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 SH3PXD2BA1X283 911 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 UNC119BA6NIH7 251 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 XKRYO14609 159 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 CDC42EP2O14613 210 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 GYG2O15488 501 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 AHCYL1O43865 530 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 OR10H3O60404 316 aa6.06□□□□□ -1.44
TOP3A-207ENST00000493648 PTP4A3O75365 173 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms