RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 BCORP1Q8N888 145 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CEP112Q8N8E3 955 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 GATSQ8NAP1 163 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 B3GNT7Q8NFL0 401 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 OR2L5Q8NG80 312 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 OR2M7Q8NG81 312 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 OR9A2Q8NGT5 310 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 METTL21AQ8WXB1 218 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ATL1Q8WXF7 558 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CIDECQ96AQ7 238 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 EXOSC8Q96B26 276 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SLC22A18Q96BI1 424 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 EFHD2Q96C19 240 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 GPR137Q96N19 417 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CPNE1Q99829 537 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 C19orf43Q9BQ61 176 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 AIF1LQ9BQI0 150 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 UTP23Q9BRU9 249 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 BTBD10Q9BSF8 475 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 DEFB126Q9BYW3 111 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NXF5Q9H1B4 397 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 RABEP2Q9H5N1 569 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NOL11Q9H8H0 719 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ACTR8Q9H981 624 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 COPS7BQ9H9Q2 264 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 MAN2C1Q9NTJ4 1040 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 MRGBPQ9NV56 204 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 C14orf105Q9NVL8 296 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NDE1Q9NXR1 346 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 OPTCQ9UBM4 332 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PRO0461Q9UI25 63 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PTBP2Q9UKA9 531 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 NXT1Q9UKK6 140 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 PCTPQ9UKL6 214 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 CORO1CQ9ULV4 474 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 RNF6Q9Y252 685 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 POLR3HQ9Y535 204 aaPredicted RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ASB4Q9Y574 426 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SPACA6W5XKT8 324 aa2.5□□□□□ -2.01
PTCD3-218ENST00000493430 SONP18583 2426 aaKnown RBP2.5□□□□□ -2.01
PTCD3-218ENST00000493430 ABCA1O95477 2261 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF469Q96JG9 3925 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TRAV17A0A0B4J275 112 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 EXOC1LA0A1B0GW35 172 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ANKDD1BA6NHY2 528 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ACOD1A6NK06 481 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SRRM5B3KS81 715 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 UBE2CO00762 179 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 UGT2B11O75310 529 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 BCAS1O75363 584 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CLDN9O95484 217 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TTC4O95801 387 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 BAG2O95816 211 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 IGKV1D-16P01601 117 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 IGHEP01854 428 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SERPINA6P08185 405 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 STSP08842 583 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 GPX3P22352 226 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 HIST1H1TP22492 207 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 EDNRAP25101 427 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 GDF1P27539 372 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CALRP27797 417 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PTGDSP41222 190 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MAGEA12P43365 314 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SERPINB8P50452 374 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 HLCSP50747 726 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CDK9P50750 372 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 RAP1GDS1P52306 607 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MTTPP55157 894 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 AP1S2P56377 157 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PPIAP62937 165 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SIRPAP78324 504 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PLOD1Q02809 727 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SRYQ05066 204 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 STX4Q12846 297 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SCARB2Q14108 478 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SQLEQ14534 574 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 HERC3Q15034 1050 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 EBPQ15125 230 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TSC22D1Q15714 1073 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ADPRMQ3LIE5 342 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TRMT12Q53H54 448 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 GARNL3Q5VVW2 1013 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SLC25A25Q6KCM7 469 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MED27Q6P2C8 311 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ANGPTL8Q6UXH0 198 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 C4orf22Q6V702 233 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 FAM47EQ6ZV65 393 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 ABHD13Q7L211 337 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 LRRC70Q7Z2Q7 622 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 COMMD6Q7Z4G1 85 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 SNX32Q86XE0 403 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 UBQLNLQ8IYU4 475 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 TMEM156Q8N614 296 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 CCNYL1Q8N7R7 359 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PAPD5Q8NDF8 572 aaKnown RBP2.49□□□□□ -2.01
PTCD3-218ENST00000493430 PLPP5Q8NEB5 264 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 MOSPD2Q8NHP6 518 aa2.49□□□□□ -2.01
PTCD3-218ENST00000493430 UBTD2Q8WUN7 234 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms