RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SLC7A10Q9NS82 523 aa15.19■□□□□ 0.02
LIME1-208ENST00000493265 ZNF629Q9UEG4 869 aaPredicted RBP15.19■□□□□ 0.02
LIME1-208ENST00000493265 RIIAD1A6NNX1 92 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 ZAR1LA6NP61 321 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 DLGAP1O14490 977 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 TXNDC12O95881 172 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 IL18BPO95998 194 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 CGAP01215 116 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 IFNGP01579 166 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 HMGN1P05114 100 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 PGA4P0DJD7 388 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 PGA3P0DJD8 388 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 APEHP13798 732 aaKnown RBP15.18■□□□□ 0.02
LIME1-208ENST00000493265 PRF1P14222 555 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
LIME1-208ENST00000493265 AQP4P55087 323 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 FMODQ06828 376 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 FAPQ12884 760 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 SNAPC1Q16533 368 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 SLX4IPQ5VYV7 408 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 IZUMO2Q6UXV1 221 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 MRGPRGQ86SM5 289 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 C20orf196Q8IYI0 205 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 CYB561A3Q8NBI2 242 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 RELL2Q8NC24 303 aaPredicted RBP15.18■□□□□ 0.02
LIME1-208ENST00000493265 ZNF555Q8NEP9 628 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 CA5BP1Q8WTZ4 195 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 ASB5Q8WWX0 329 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 SLC38A2Q96QD8 506 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 ULBP2Q9BZM5 246 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 PLSCR4Q9NRQ2 329 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 FAM118AQ9NWS6 357 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 GPR52Q9Y2T5 361 aa15.18■□□□□ 0.02
LIME1-208ENST00000493265 PRSS37A4D1T9 235 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 NKX2-6A6NCS4 301 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 RENP00797 406 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 QDPRP09417 244 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 VHLP40337 213 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 CRMP1Q14194 572 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 SLC37A3Q8NCC5 494 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 FAM81AQ8TBF8 368 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 NSMAFQ92636 917 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 TMEM54Q969K7 222 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 RBP7Q96R05 134 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 KCNK17Q96T54 332 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 PIGMQ9H3S5 423 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 MED20Q9H944 212 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 B3GAT2Q9NPZ5 323 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 GLTPQ9NZD2 209 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 KLHL21Q9UJP4 597 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 GMPPBQ9Y5P6 360 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 MYO7BQ6PIF6 2116 aa15.17■□□□□ 0.02
LIME1-208ENST00000493265 LOC100130705A0A1B0GUX0 176 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 SLC22A23A1A5C7 686 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 FAM183AA6NL82 134 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 SURF4O15260 269 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 CD8BP10966 210 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 ZNF3P17036 446 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 CENPAP49450 140 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 FOXG1P55316 489 aaPredicted RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 ROR2Q01974 943 aaKnown RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 ITGADQ13349 1161 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 CDSNQ15517 529 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 FBXW9Q5XUX1 488 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 C12orf73Q69YU5 71 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 LINGO2Q7L985 606 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 ADCK1Q86TW2 530 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 POMGNT2Q8NAT1 580 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 OR9Q1Q8NGQ5 310 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 RDH12Q96NR8 316 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 FOXN4Q96NZ1 517 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 TSSK2Q96PF2 358 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 IL4I1Q96RQ9 567 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 ALG12Q9BV10 488 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 RBM24Q9BX46 236 aaKnown RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 MRPL13Q9BYD1 178 aaKnown RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 SYT4Q9H2B2 425 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 CRLF2Q9HC73 371 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 SRA1Q9HD15 236 aaKnown RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 CMC2Q9NRP2 79 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 ASB6Q9NWX5 421 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 IMPAD1Q9NX62 359 aa15.16■□□□□ 0.02
LIME1-208ENST00000493265 FOXD3Q9UJU5 478 aaPredicted RBP15.16■□□□□ 0.02
LIME1-208ENST00000493265 APCP25054 2843 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 OR6C68A6NDL8 312 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 PRSS44E7EML9 344 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 MSTNO14793 375 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 PRKYO43930 277 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 SLC16A7O60669 478 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 CLIC3O95833 236 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 GGT2P36268 569 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 CDC42P60953 191 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 LRFN4Q6PJG9 635 aa15.15■□□□□ 0.02
LIME1-208ENST00000493265 ZNF474Q6S9Z5 364 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms