RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KNTC1P50748 2209 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 SHISA3A0PJX4 238 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 ZIC3O60481 467 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 RAD1O60671 282 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 HLA-DQA2P01906 255 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 CTLA4P16410 223 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 MYL9P24844 172 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 OR2B6P58173 313 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 SLC35A1P78382 337 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 POU3F1Q03052 451 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-216ENST00000492977 GLO1Q04760 184 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 TMEM176BQ3YBM2 270 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-216ENST00000492977 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 NHLRC1Q6VVB1 395 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 DCDC5Q6ZRR9 648 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 TRILQ7L0X0 811 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 DPY19L4Q7Z388 723 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 MINDY2Q8NBR6 621 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 OR5M1Q8NGP8 315 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 OTOSQ8NHW6 89 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 GNRHR2Q96P88 292 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 IP6K3Q96PC2 410 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 MROQ9BYG7 248 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-216ENST00000492977 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
PTPN7-216ENST00000492977 KLHDC2Q9Y2U9 406 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 FRYLO94915 3013 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
PTPN7-216ENST00000492977 TRAV1-2A0A0B4J238 106 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 PRR32B1ATL7 298 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 STMND1H3BQB6 276 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-216ENST00000492977 DVL2O14641 736 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 PMS2P2O95744 297 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ABHD16AO95870 558 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF17P17021 662 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 TCEA1P23193 301 aaKnown RBP12.58□□□□□ -0.4
PTPN7-216ENST00000492977 SHC1P29353 583 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 PSMB10P40306 273 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 P2RY4P51582 365 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 B3GNTL1Q67FW5 361 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-216ENST00000492977 MZT2AQ6P582 158 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 TMPPEQ6ZT21 453 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 HDDC2Q7Z4H3 204 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 MDGA2Q7Z553 956 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 UEVLDQ8IX04 471 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 CENPSQ8N2Z9 138 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 YIPF7Q8N8F6 280 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ACOT12Q8WYK0 555 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 PSMF1Q92530 271 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 CCDC32Q9BV29 185 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
PTPN7-216ENST00000492977 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 ABCB9Q9NP78 766 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 DKKL1Q9UK85 242 aa12.58□□□□□ -0.4
PTPN7-216ENST00000492977 CACNA1HO95180 2353 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 LOC101059948A0A1B0GTJ6 334 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 SULT2B1O00204 365 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 UPK3AO75631 287 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 ARL6IP5O75915 188 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 OR8G3PP0DMU2 310 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 TGM1P22735 817 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 SFTPDP35247 375 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 CYB561P49447 251 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 CAV3P56539 151 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 PPP3R1P63098 170 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 ATP1A4Q13733 1029 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 YIF1BQ5BJH7 314 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 LIPNQ5VXI9 398 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 SLC18B1Q6NT16 456 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 THEM6Q8WUY1 208 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 THOC3Q96J01 351 aaKnown RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 TXNDC15Q96J42 360 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 JSRP1Q96MG2 331 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 OXGR1Q96P68 337 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 UBL7Q96S82 380 aaPredicted RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 ATF6BQ99941 703 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 PIGQQ9BRB3 760 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 RNF32Q9H0A6 362 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 MRPL22Q9NWU5 206 aaKnown RBP12.57□□□□□ -0.4
PTPN7-216ENST00000492977 TEKT2Q9UIF3 430 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF281Q9Y2X9 895 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 WDFY4Q6ZS81 3184 aa12.57□□□□□ -0.4
PTPN7-216ENST00000492977 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 G3V3Y1 287 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms