RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 QDPRP09417 244 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 TROVE2P10155 538 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 IGFBP5P24593 272 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 APEX1P27695 318 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 RAD52P43351 418 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 DAP3P51398 398 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 CLRN1P58418 232 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 TAS2R41P59536 307 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 PLP2Q04941 152 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 RIN1Q13671 783 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 SELPLGQ14242 412 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 FXNQ16595 210 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 LRFN4Q6PJG9 635 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 UNQ6126/PRO20091Q6UXV3 157 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 RBM45Q8IUH3 476 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 PHC2Q8IXK0 858 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 CDK20Q8IZL9 346 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 PCYOX1LQ8NBM8 494 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 RDH5Q92781 318 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 TAMM41Q96BW9 452 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 LRRC58Q96CX6 371 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 THOC1Q96FV9 657 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 MRPL37Q9BZE1 423 aaKnown RBP10.73□□□□□ -0.69
COL6A1-205ENST00000492851 RNF121Q9H920 327 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 GID8Q9NWU2 228 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF224Q9NZL3 707 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 DUSP13Q9UII6 198 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 AP3M1Q9Y2T2 418 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 GMNCA6NCL1 334 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 B4DSR2 109 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 MCIDASD6RGH6 385 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 KPNA4O00629 521 aaPredicted RBP10.72□□□□□ -0.69
COL6A1-205ENST00000492851 LILRA1O75019 489 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 LYPD3O95274 346 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 THY1P04216 161 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 FUT1P19526 365 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 ACHEP22303 614 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 GZMMP51124 257 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 RAB39AQ14964 217 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 HIST3H3Q16695 136 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 PCGF3Q3KNV8 242 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 WDR88Q6ZMY6 472 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 SLC16A14Q7RTX9 510 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 C1orf174Q8IYL3 243 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 LRRC17Q8N6Y2 441 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 ARIH2OSQ8N7S6 290 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 SLC30A7Q8NEW0 376 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 OR4D11Q8NGI4 311 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 FNDC8Q8TC99 324 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 LIPHQ8WWY8 451 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 C11orf40Q8WZ69 217 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 BCL2L14Q9BZR8 327 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 CDH20Q9HBT6 801 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 SLCO1C1Q9NYB5 712 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 TMEFF2Q9UIK5 374 aaPredicted RBP10.72□□□□□ -0.69
COL6A1-205ENST00000492851 RIMS3Q9UJD0 308 aa10.72□□□□□ -0.69
COL6A1-205ENST00000492851 A0A1W2PPW3 197 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 LRP5LA4QPB2 252 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 NPIPB13A6NJU9 1138 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 NPIPB4C9JG80 1138 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SNAP29O95721 258 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 MT-ND5P03915 603 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 ACADSP16219 412 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 GUCA1AP43080 201 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-205ENST00000492851 ARFIP2P53365 341 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 DVL1P1P54792 670 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TEKQ02763 1124 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SCGB2A2Q13296 93 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TAF11Q15544 211 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TBC1D28Q2M2D7 210 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 CR1LQ2VPA4 569 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-205ENST00000492851 FBN3Q75N90 2809 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 CARM1Q86X55 608 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 CALHM3Q86XJ0 350 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TEX29Q8N6K0 151 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 OR4K5Q8NGD3 323 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF519Q8TB69 540 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SYNPRQ8TBG9 265 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM239Q8WW34 195 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 MCHR2Q969V1 340 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SGTBQ96EQ0 304 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SNX18Q96RF0 628 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SEPHS2Q99611 448 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SYT3Q9BQG1 590 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 PRSS27Q9BQR3 290 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF416Q9BWM5 594 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM120AQ9BXJ8 343 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 MRPL13Q9BYD1 178 aaKnown RBP10.71□□□□□ -0.69
COL6A1-205ENST00000492851 TPK1Q9H3S4 243 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SIAEQ9HAT2 523 aa10.71□□□□□ -0.69
COL6A1-205ENST00000492851 SMURF2Q9HAU4 748 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms