RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RAB3BP20337 219 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 PYCR1P32322 319 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 BTCP35070 178 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 RRADP55042 308 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 SNRPD2P62316 118 aaKnown RBP20.53■□□□□ 0.88
USF3-203ENST00000491165 BCL2L15Q5TBC7 163 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 LAMTOR1Q6IAA8 161 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 JMJD6Q6NYC1 403 aaPredicted RBP20.53■□□□□ 0.88
USF3-203ENST00000491165 ZNF614Q8N883 585 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 OR5J2Q8NH18 312 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 SMAP2Q8WU79 429 aaPredicted RBP20.53■□□□□ 0.88
USF3-203ENST00000491165 GHSRQ92847 366 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 SNAPC3Q92966 411 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 HGDQ93099 445 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 SPACA9Q96E40 222 aaPredicted RBP20.53■□□□□ 0.88
USF3-203ENST00000491165 POLE3Q9NRF9 147 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 NBEAQ8NFP9 2946 aa20.53■□□□□ 0.88
USF3-203ENST00000491165 CACNA1GO43497 2377 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 A0A0B4J2E0 115 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 A0A1B0GX12 115 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 PEPDP12955 493 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 CCL11P51671 97 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 SOX8P57073 446 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 ARHGAP11AQ6P4F7 1023 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 RTL4Q6ZR62 310 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 ZNF767PQ75MW2 155 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 ZNF227Q86WZ6 799 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 FDCSPQ8NFU4 85 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 MED28Q9H204 178 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 EVA1AQ9H8M9 152 aa20.52■□□□□ 0.88
USF3-203ENST00000491165 RRP8O43159 456 aaKnown RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 SERPINA3P01011 423 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 GYPBP06028 91 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 GUSBP08236 651 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 SLC6A6P31641 620 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 SSR4P51571 173 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 PSMD4P55036 377 aaKnown RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 CD226Q15762 336 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 LINC00696Q6ZRV3 163 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 GATSQ8NAP1 163 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 DPAGT1Q9H3H5 408 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 ZNF552Q9H707 407 aaPredicted RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 STMN3Q9NZ72 180 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 TNRC6AQ8NDV7 1962 aaKnown RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 NOTOA8MTQ0 251 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 ZNF141Q15928 474 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 SSX6Q7RTT6 188 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 GHDCQ8N2G8 530 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 CNOT9Q92600 299 aaKnown RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 TNFRSF13CQ96RJ3 184 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 UBQLN4Q9NRR5 601 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 NUDT15Q9NV35 164 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 ST6GALNAC2Q9UJ37 374 aa20.51■□□□□ 0.87
USF3-203ENST00000491165 MRTO4Q9UKD2 239 aaKnown RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 CHCHD2Q9Y6H1 151 aaPredicted RBP20.51■□□□□ 0.87
USF3-203ENST00000491165 A0A1B0GWA3 101 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 A0A1W2PRG6 482 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 C7orf66A4D0T2 115 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 SRP9P49458 86 aaKnown RBP20.5■□□□□ 0.87
USF3-203ENST00000491165 FCN2Q15485 313 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 NDUFAF6Q330K2 333 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 SLC36A2Q495M3 483 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 CCDC58Q4VC31 144 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 KLHL26Q53HC5 615 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 FAM205BPQ63HN1 556 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 MDGA2Q7Z553 956 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 SLC43A2Q8N370 569 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 TMEM156Q8N614 296 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 LRRC17Q8N6Y2 441 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 OR13C5Q8NGS8 318 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 PHF21AQ96BD5 680 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 MCCC2Q9HCC0 563 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 TRAV6A0A075B6T7 132 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 TRAV1-2A0A0B4J238 106 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 FADS1O60427 444 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 ADAM11O75078 769 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 RBM34P42696 430 aaKnown RBP20.5■□□□□ 0.87
USF3-203ENST00000491165 SCMH1Q96GD3 660 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 KLHDC3Q9BQ90 382 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 NUBP2Q9Y5Y2 271 aa20.5■□□□□ 0.87
USF3-203ENST00000491165 C2orf72A6NCS6 295 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 K7ENP7 123 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 UBL3O95164 117 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 NAGAP17050 411 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 STOMP27105 288 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 PITPNAQ00169 270 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 FNDC7Q5VTL7 733 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 INO80CQ6PI98 192 aaPredicted RBP20.49■□□□□ 0.87
USF3-203ENST00000491165 MARCH3Q86UD3 253 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 TOMM5Q8N4H5 51 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 OR5H6Q8NGV6 325 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 C17orf50Q8WW18 174 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 ZNF426Q9BUY5 554 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 PLA2G3Q9NZ20 509 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 ABRACLQ9P1F3 81 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 HRH3Q9Y5N1 445 aa20.49■□□□□ 0.87
USF3-203ENST00000491165 PRRC2CQ9Y520 2896 aaKnown RBP20.49■□□□□ 0.87
USF3-203ENST00000491165 FABP7O15540 132 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 FGFBP1Q14512 234 aa20.48■□□□□ 0.87
USF3-203ENST00000491165 OPN5Q6U736 354 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms