RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NMRAL1Q9HBL8 299 aa2.62□□□□□ -1.99
CCDC39-206ENST00000489868 MCCC2Q9HCC0 563 aa2.62□□□□□ -1.99
CCDC39-206ENST00000489868 SH3BGRL2Q9UJC5 107 aa2.62□□□□□ -1.99
CCDC39-206ENST00000489868 MRPS7Q9Y2R9 242 aaKnown RBP2.62□□□□□ -1.99
CCDC39-206ENST00000489868 GPR179Q6PRD1 2367 aa2.62□□□□□ -1.99
CCDC39-206ENST00000489868 COL27A1Q8IZC6 1860 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 HIDE1A8MVS5 230 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 MAGEB3O15480 346 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 LINC00869P0C866 280 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 CYB561P49447 251 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 EXOC3L2Q2M3D2 409 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 ZNF684Q5T5D7 378 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 KPRPQ5T749 579 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 FBXW9Q5XUX1 488 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 SHISA6Q6ZSJ9 500 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 LHFPL3Q86UP9 236 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 MYOCDQ8IZQ8 938 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 TMEM54Q969K7 222 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 RBMXL1Q96E39 390 aaKnown RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 RPRD1AQ96P16 312 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 TSGA13Q96PP4 275 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 FMO2Q99518 471 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 MRPL37Q9BZE1 423 aaKnown RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 ZDHHC4Q9NPG8 344 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 KIAA1257Q9ULG3 409 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 RFNGQ9Y644 331 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 CENPJQ9HC77 1338 aaPredicted RBP2.61□□□□□ -1.99
CCDC39-206ENST00000489868 BRWD3Q6RI45 1802 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 TUBGCP6Q96RT7 1819 aa2.61□□□□□ -1.99
CCDC39-206ENST00000489868 TNS2Q63HR2 1409 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 HIVEP2P31629 2446 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 IGHV5-10-1A0A0J9YXX1 117 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 A0A1W2PPV9 198 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 ZNF207O43670 478 aaKnown RBP2.6□□□□□ -1.99
CCDC39-206ENST00000489868 MPZL1O95297 269 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 C6orf47O95873 294 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 CD1CP29017 333 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 GDI1P31150 447 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 ATP5C1P36542 298 aaKnown RBP2.6□□□□□ -1.99
CCDC39-206ENST00000489868 CDKN1BP46527 198 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 YAP1P46937 504 aaKnown RBP2.6□□□□□ -1.99
CCDC39-206ENST00000489868 RORCP51449 518 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 CACNG7P62955 275 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 PPIL2Q13356 520 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 ZNF77Q15935 545 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 CFAP157Q5JU67 520 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 PHYHD1Q5SRE7 291 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 DNAJC24Q6P3W2 148 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 OR52P1PQ8NH57 321 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 C12orf42Q96LP6 360 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 CNN2Q99439 309 aaKnown RBP2.6□□□□□ -1.99
CCDC39-206ENST00000489868 AZI2Q9H6S1 392 aa2.6□□□□□ -1.99
CCDC39-206ENST00000489868 MRPS18BQ9Y676 258 aaKnown RBP2.6□□□□□ -1.99
CCDC39-206ENST00000489868 C7orf66A4D0T2 115 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 CCL21O00585 134 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 TIMM8AO60220 97 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-206ENST00000489868 UTS2O95399 124 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 GNAO1P09471 354 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 IGHV1-8P0DP01 117 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ZNF92Q03936 586 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ERCC8Q13216 396 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ATAD3BQ5T9A4 648 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 CEMP1Q6PRD7 247 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-206ENST00000489868 HSD17B11Q8NBQ5 300 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 FAM83FQ8NEG4 500 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-206ENST00000489868 OR2G2Q8NGZ5 317 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 OR10C1Q96KK4 312 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 HSFY1Q96LI6 401 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 TMEM59Q9BXS4 323 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ULBP2Q9BZM5 246 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ANKRD19PQ9H560 264 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ZNRD1Q9P1U0 126 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 ATP6V0A2Q9Y487 856 aa2.59□□□□□ -1.99
CCDC39-206ENST00000489868 IGHV3-74A0A0B4J1X5 117 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 A0A1B0GVL5 298 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 BICDL2A1A5D9 508 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 SNTNA6NMZ2 147 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 SPECC1L-ADORA2AF8WAN1 911 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 RPL36A-HNRNPH2H7BZ11 118 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 RBFOX2O43251 390 aaKnown RBP eCLIP2.58□□□□□ -2
CCDC39-206ENST00000489868 RCBTB2O95199 551 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 BCHEP06276 602 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 DBTP11182 482 aaKnown RBP2.58□□□□□ -2
CCDC39-206ENST00000489868 DESP17661 470 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 AK4P27144 223 aaPredicted RBP2.58□□□□□ -2
CCDC39-206ENST00000489868 HRH1P35367 487 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 VHLP40337 213 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 UBE2HP62256 183 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 LOXL1Q08397 574 aaPredicted RBP2.58□□□□□ -2
CCDC39-206ENST00000489868 MRPL28Q13084 256 aaKnown RBP2.58□□□□□ -2
CCDC39-206ENST00000489868 COX19Q49B96 90 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 KCTD21Q4G0X4 260 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 SPECC1LQ69YQ0 1117 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 OR2A2Q6IF42 318 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 ARRDC1Q8N5I2 433 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 OR1L4Q8NGR5 311 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 PLEKHA8Q96JA3 519 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 SPNS1Q9H2V7 528 aa2.58□□□□□ -2
CCDC39-206ENST00000489868 RPF2Q9H7B2 306 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms