RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RBP7Q96R05 134 aa18.57■□□□□ 0.56
SND1-214ENST00000489417 OR2M2Q96R28 347 aa18.57■□□□□ 0.56
SND1-214ENST00000489417 CNN2Q99439 309 aaKnown RBP18.57■□□□□ 0.56
SND1-214ENST00000489417 PRRG4Q9BZD6 226 aa18.57■□□□□ 0.56
SND1-214ENST00000489417 RACGAP1Q9H0H5 632 aa18.57■□□□□ 0.56
SND1-214ENST00000489417 PRORYQ9H606 182 aa18.57■□□□□ 0.56
SND1-214ENST00000489417 CFAP47Q6ZTR5 3102 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 DMXL2Q8TDJ6 3036 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 ANKRD11Q6UB99 2663 aaPredicted RBP18.56■□□□□ 0.56
SND1-214ENST00000489417 A0A1B0GTH9 108 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 J3QRE1 110 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 FMODQ06828 376 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 Q8NA96 180 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 FNDC9Q8TBE3 224 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 FNDC8Q8TC99 324 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 FCGR1BQ92637 280 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 MUL1Q969V5 352 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 GPR137Q96N19 417 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 JAM3Q9BX67 310 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 CHCHD3Q9NX63 227 aaKnown RBP18.56■□□□□ 0.56
SND1-214ENST00000489417 KLHL9Q9P2J3 617 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 PTPRQQ9UMZ3 2332 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 RCE1Q9Y256 329 aa18.56■□□□□ 0.56
SND1-214ENST00000489417 IGKV3D-15A0A087WSY6 115 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 DPPA5A6NC42 116 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 OR14I1A6ND48 311 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 KHDRBS3O75525 346 aaKnown RBP18.55■□□□□ 0.56
SND1-214ENST00000489417 AQP8O94778 261 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 ZNF432O94892 652 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 PTHP01270 115 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 NAA10P41227 235 aaPredicted RBP18.55■□□□□ 0.56
SND1-214ENST00000489417 CENPAP49450 140 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 ETV1P50549 477 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 BLVRAP53004 296 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 THEM4Q5T1C6 240 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 ZNF511Q8NB15 262 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 RORBQ92753 470 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 NMD3Q96D46 503 aaKnown RBP18.55■□□□□ 0.56
SND1-214ENST00000489417 CLEC2DQ9UHP7 191 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 ING1Q9UK53 422 aaPredicted RBP18.55■□□□□ 0.56
SND1-214ENST00000489417 ERGIC3Q9Y282 383 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 ZNF175Q9Y473 711 aa18.55■□□□□ 0.56
SND1-214ENST00000489417 LOC400499M0QZD8 3231 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 ZNF99A8MXY4 864 aaPredicted RBP18.54■□□□□ 0.56
SND1-214ENST00000489417 GPR171O14626 319 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 SELENOFO60613 162 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 NR2C1P13056 603 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 CSNK1A1P48729 337 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 ETFDHQ16134 617 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 HIST3H3Q16695 136 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 UBE2UQ5VVX9 321 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 LYPD4Q6UWN0 246 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 PLXDC2Q6UX71 529 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 SATL1Q86VE3 508 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 TMEM123Q8N131 208 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 ACBD7Q8N6N7 88 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 OR10H4Q8NGA5 316 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 TMEM54Q969K7 222 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 TMEM45BQ96B21 275 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 ZNF775Q96BV0 537 aaPredicted RBP18.54■□□□□ 0.56
SND1-214ENST00000489417 INPP5EQ9NRR6 644 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 EMC3Q9P0I2 261 aa18.54■□□□□ 0.56
SND1-214ENST00000489417 COA3Q9Y2R0 106 aaPredicted RBP18.54■□□□□ 0.56
SND1-214ENST00000489417 IGKV1D-43A0A0B4J1Z2 117 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 TVP23AA6NH52 213 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 SLC22A20A6NK97 555 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 C12orf71A8MTZ7 269 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 MYL12BO14950 172 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 INMTO95050 263 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 TFP02787 698 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 LCKP06239 509 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 LIMS3P0CW19 117 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 LIMS4P0CW20 117 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 SELENOPP49908 381 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 ACTC1P68032 377 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 ACTA1P68133 377 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 RNPS1Q15287 305 aaKnown RBP18.53■□□□□ 0.56
SND1-214ENST00000489417 ZNF324BQ6AW86 544 aaPredicted RBP18.53■□□□□ 0.56
SND1-214ENST00000489417 AAED1Q7RTV5 226 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 SLC16A9Q7RTY1 509 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 SLC35F2Q8IXU6 374 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 NANOGP1Q8N7R0 232 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 OR6N1Q8NGY5 312 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 TMIGD2Q96BF3 282 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 TBX5Q99593 518 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 MND1Q9BWT6 205 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 MARCH7Q9H992 704 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 RNF122Q9H9V4 155 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 ERVK13-1Q9NX77 482 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 GLTPQ9NZD2 209 aa18.53■□□□□ 0.56
SND1-214ENST00000489417 DAPL1A0PJW8 107 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 A6NHS1 94 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 ZNHIT1O43257 154 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 SLC43A1O75387 559 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 GPANK1O95872 356 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 FCGR2AP12318 317 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 PTGS2P35354 604 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 RAB39AQ14964 217 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 KRTCAP3Q53RY4 240 aa18.52■□□□□ 0.56
SND1-214ENST00000489417 SLC25A47Q6Q0C1 308 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms