RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CFPP27918 469 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 LSP1P33241 339 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 NKPD1Q17RQ9 610 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 AGKQ53H12 422 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 RUNDC3AQ59EK9 446 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 ENTPD8Q5MY95 495 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 LRFN4Q6PJG9 635 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 DLEU7Q6UYE1 221 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 TSPYL5Q86VY4 417 aaPredicted RBP10.6□□□□□ -0.71
CPSF3-204ENST00000489403 SLC30A7Q8NEW0 376 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 OR4D11Q8NGI4 311 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 OR51F2Q8NH61 342 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 ZFAND2BQ8WV99 257 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 SLC25A44Q96H78 314 aaPredicted RBP10.6□□□□□ -0.71
CPSF3-204ENST00000489403 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF416Q9BWM5 594 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 TMEM38BQ9NVV0 291 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
CPSF3-204ENST00000489403 SLC22A23A1A5C7 686 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 C17orf100A8MU93 164 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 RNF13O43567 381 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 ERLIN1O75477 346 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 RGS9O75916 674 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 PGA4P0DJD7 388 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 PGA3P0DJD8 388 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF250P15622 560 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 ATP4BP51164 291 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 RBBP4Q09028 425 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 SELPLGQ14242 412 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 SHQ1Q6PI26 577 aaKnown RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 TTC33Q6PID6 262 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 THSD4Q6ZMP0 1018 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 C1orf229Q6ZS94 237 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 RBM45Q8IUH3 476 aaKnown RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 LRRC17Q8N6Y2 441 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 C11orf65Q8NCR3 313 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 OR4K5Q8NGD3 323 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 ADAMTS16Q8TE57 1224 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 OR51B6Q9H340 312 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 RNF121Q9H920 327 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 CDH20Q9HBT6 801 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CPSF3-204ENST00000489403 G6PC2Q9NQR9 355 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 NANSQ9NR45 359 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 ZNF229Q9UJW7 825 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 SLC7A7Q9UM01 511 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 NBEAL1Q6ZS30 2694 aa10.59□□□□□ -0.71
CPSF3-204ENST00000489403 DYSFO75923 2080 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 M0QX08 132 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 CDC14BO60729 498 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 ENTPD5O75356 428 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 FARS2O95363 451 aaKnown RBP10.58□□□□□ -0.72
CPSF3-204ENST00000489403 SNAP29O95721 258 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 PNPP00491 289 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 AVPP01185 164 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 QDPRP09417 244 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 ASAH2BP0C7U1 165 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 KLF3P57682 345 aaPredicted RBP10.58□□□□□ -0.72
CPSF3-204ENST00000489403 MTPNP58546 118 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 SELENOVP59797 346 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 CCL8P80075 99 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 MYBPC1Q00872 1141 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 RUNX1T1Q06455 604 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 CYP51A1Q16850 503 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 TBC1D28Q2M2D7 210 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 AVPI1Q5T686 147 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 FAHD2BQ6P2I3 314 aaPredicted RBP10.58□□□□□ -0.72
CPSF3-204ENST00000489403 SLC16A14Q7RTX9 510 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 DHDDSQ86SQ9 333 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 VANGL1Q8TAA9 524 aaPredicted RBP10.58□□□□□ -0.72
CPSF3-204ENST00000489403 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 LRRC8CQ8TDW0 803 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF347Q96SE7 839 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF426Q9BUY5 554 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 PLA2G12AQ9BZM1 189 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF665Q9H7R5 613 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 LEF1Q9UJU2 399 aaPredicted RBP10.58□□□□□ -0.72
CPSF3-204ENST00000489403 TRIM33Q9UPN9 1127 aa10.58□□□□□ -0.72
CPSF3-204ENST00000489403 LOC105371242A0A075B767 164 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 TRAPPC13A5PLN9 417 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 BCL10O95999 233 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 IGHG1P01857 330 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 LCKP06239 509 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 UMPSP11172 480 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 CD247P20963 164 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 EPHA1P21709 976 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 CRYBB2P43320 205 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 UCP2P55851 309 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 CLRN1P58418 232 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 ACTG1P63261 375 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 MVKQ03426 396 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 SCGB2A2Q13296 93 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 HIST3H3Q16695 136 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 SLC36A2Q495M3 483 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms