RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 POLR2J3Q9H1A7 115 aaKnown RBP12.11□□□□□ -0.47
VTI1A-206ENST00000489142 MOV10Q9HCE1 1003 aaKnown RBP12.11□□□□□ -0.47
VTI1A-206ENST00000489142 MAN2C1Q9NTJ4 1040 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 TMEM38BQ9NVV0 291 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 ADAM21Q9UKJ8 722 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 FKBP7Q9Y680 259 aa12.11□□□□□ -0.47
VTI1A-206ENST00000489142 TMEM129A0AVI4 362 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 FFAR1O14842 300 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 DHHO43323 396 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 TRMUO75648 421 aaKnown RBP12.1□□□□□ -0.47
VTI1A-206ENST00000489142 PDE5AO76074 875 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 UBL3O95164 117 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 SLC2A10O95528 541 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 SERPINA1P01009 418 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 IFNW1P05000 195 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 IFI30P13284 250 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 CCL2P13500 99 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF35P13682 527 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 MAKP20794 623 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 NR4A1P22736 598 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 GYS2P54840 703 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 FMODQ06828 376 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 ST3GAL3Q11203 375 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 GGTLC2Q14390 218 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 TMEM249Q2WGJ8 235 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 C8orf82Q6P1X6 216 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-206ENST00000489142 PIWIL3Q7Z3Z3 882 aaKnown RBP12.1□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 LZICQ8WZA0 190 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 HSH2DQ96JZ2 352 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 KCTD14Q9BQ13 255 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-206ENST00000489142 FNDC11Q9BVV2 318 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 OR51B6Q9H340 312 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 TPK1Q9H3S4 243 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 ZNF442Q9H7R0 627 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 EFCAB1Q9HAE3 211 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 RTTNQ86VV8 2226 aa12.1□□□□□ -0.47
VTI1A-206ENST00000489142 TRAV27A0A087WT01 109 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 IGKV1D-43A0A0B4J1Z2 117 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 ADRA2AP08913 450 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 OR8G3PP0DMU2 310 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 THRBP10828 461 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 ACADSP16219 412 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 SLC25A16P16260 332 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 CDAP32320 146 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 PPOXP50336 477 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 PDLIM4P50479 330 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 IFI44LQ53G44 452 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 TBPL2Q6SJ96 375 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 FKBP9P1Q75LS8 142 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 RNF148Q8N7C7 305 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 GEMIN6Q8WXD5 167 aaKnown RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 NSMAFQ92636 917 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 HDAC2Q92769 488 aaKnown RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 BPIFA2Q96DR5 249 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 FOXN4Q96NZ1 517 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 DOK1Q99704 481 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 MRPL37Q9BZE1 423 aaKnown RBP12.09□□□□□ -0.47
VTI1A-206ENST00000489142 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 RNF121Q9H920 327 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 EGFL7Q9UHF1 273 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
VTI1A-206ENST00000489142 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 CRLF1O75462 422 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 CSF3P09919 207 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 SAGP10523 405 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF16P17020 682 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 DRD4P21917 467 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 GPR4P46093 362 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 PSME3P61289 254 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 GALK2Q01415 458 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 CD47Q08722 323 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 MAD2L1BPQ15013 274 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 HIST3H3Q16695 136 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 ALG10Q5BKT4 473 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 CBLL1Q75N03 491 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 LRP11Q86VZ4 500 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 IL17RDQ8NFM7 739 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 OR13C2Q8NGS9 318 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 OR51A7Q8NH64 312 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 LIPHQ8WWY8 451 aa12.08□□□□□ -0.48
VTI1A-206ENST00000489142 HOPXQ9BPY8 73 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-206ENST00000489142 PIMREGQ9BSJ6 248 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms