RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMIGD1Q6UXZ0 262 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 TMCO2Q7Z6W1 182 aaPredicted RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 SCD5Q86SK9 330 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 H1FOOQ8IZA3 346 aaPredicted RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 BPIFCQ8NFQ6 507 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 OR6C4Q8NGE1 309 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 OR2G2Q8NGZ5 317 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 KIR2DL5BQ8NHK3 375 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 PLPPR1Q8TBJ4 325 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ACMSDQ8TDX5 336 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 CCDC126Q96EE4 140 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ITCHQ96J02 903 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 OR2M2Q96R28 347 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 PANX1Q96RD7 426 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 NAT9Q9BTE0 207 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 SLC17A9Q9BYT1 436 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 PLA2G2FQ9BZM2 168 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 INPP5EQ9NRR6 644 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 AIG1Q9NVV5 245 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 LYARQ9NX58 379 aaKnown RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 ZNF282Q9UDV7 671 aaPredicted RBP2.07□□□□□ -2.08
RFC4-213ENST00000489028 KIF25Q9UIL4 384 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ASF1AQ9Y294 204 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 ASTN1O14525 1302 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 CDHR2Q9BYE9 1310 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 SYNRGQ9UMZ2 1314 aa2.07□□□□□ -2.08
RFC4-213ENST00000489028 IGKV2-28A0A075B6P5 120 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 IGKV1D-8A0A087WSZ0 117 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 IGHV3-64DA0A0J9YX35 117 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 GOLGA6L7A0A1B0GV03 622 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 NKX2-6A6NCS4 301 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 SMCO2A6NFE2 343 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ERVV-1B6SEH8 477 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 AGPAT2O15120 278 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 MGRN1O60291 552 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ICOSLGO75144 302 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 FOXH1O75593 365 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 IGKV2D-28P01615 120 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 IGHV2-5P01817 119 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 OR8G3PP0DMU2 310 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 MAGP20916 626 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 CXCR2P25025 360 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 GTF2E2P29084 291 aaKnown RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 HMOX2P30519 316 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 PMELP40967 661 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 NAA10P41227 235 aaPredicted RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 MAGEA1P43355 309 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 TFPI2P48307 235 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 UGT2B15P54855 530 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ATP6AP1Q15904 470 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 C1orf100Q5SVJ3 147 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 TSPO2Q5TGU0 170 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 TWF2Q6IBS0 349 aaKnown RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 TRIM40Q6P9F5 258 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 SASS6Q6UVJ0 657 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 CLEC2AQ6UVW9 174 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ANGPTL8Q6UXH0 198 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 COX15Q7KZN9 410 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 NIPA1Q7RTP0 329 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 SLC16A14Q7RTX9 510 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 PEX26Q7Z412 305 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ZNF546Q86UE3 836 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 OFCC1Q8IZS5 231 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 GABRG1Q8N1C3 465 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 LIX1Q8N485 282 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 PNKDQ8N490 385 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 NKAPP1Q8N9T2 125 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 OR4A4PQ8NGN8 299 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 TMEM158Q8WZ71 300 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 UCN3Q969E3 161 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 MS4A4EQ96PG1 132 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ATP5SQ99766 215 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 CTRCQ99895 268 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 RASL11BQ9BPW5 248 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 BPIFA3Q9BQP9 254 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 PELOQ9BRX2 385 aaKnown RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 FAIM2Q9BWQ8 316 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 TMEM59Q9BXS4 323 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 C20orf85Q9H1P6 137 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 SLC25A22Q9H936 323 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ANKRA2Q9H9E1 313 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 LY9Q9HBG7 655 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 ADAP2Q9NPF8 381 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 SAMSN1Q9NSI8 373 aaKnown RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 C20orf96Q9NUD7 363 aaPredicted RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 EXD2Q9NVH0 621 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 MRPL22Q9NWU5 206 aaKnown RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 STOX2Q9P2F5 926 aaPredicted RBP2.06□□□□□ -2.08
RFC4-213ENST00000489028 VANGL2Q9ULK5 521 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 MMP17Q9ULZ9 603 aa2.06□□□□□ -2.08
RFC4-213ENST00000489028 IGLV4-69A0A075B6H9 119 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 A0A096LNJ9 63 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 SIRPB1O00241 398 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 CDC7O00311 574 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 NDUFAB1O14561 156 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 RAB29O14966 203 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 PPP1R2P9O14990 202 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 OR2F2O95006 317 aa2.05□□□□□ -2.08
RFC4-213ENST00000489028 FGFR1OPO95684 399 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms