RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 GSTA4O15217 222 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 DHHO43323 396 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 IFNW1P05000 195 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 OR8G3PP0DMU2 310 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 PRDX6P30041 224 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 THBS4P35443 961 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 GIPRP48546 466 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF84P51523 738 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 MNAT1P51948 309 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 RAB1AP62820 205 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 GALK2Q01415 458 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 LIPEQ05469 1076 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 PIGFQ07326 219 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 HACD2Q6Y1H2 254 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 WDFY1Q8IWB7 410 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC15A3Q8IY34 581 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 GEMIN6Q8WXD5 167 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 TNFRSF13CQ96RJ3 184 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 INIPQ9NRY2 104 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 TMEM38BQ9NVV0 291 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 CMTM6Q9NX76 183 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF224Q9NZL3 707 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 CMAHPQ9Y471 501 aa11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-207ENST00000488921 ABCA1O95477 2261 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 A0A096LNT2 108 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 CXCR6O00574 342 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 MGRN1O60291 552 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 CRLF1O75462 422 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 QDPRP09417 244 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 TSPAN19P0C672 248 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 NR4A1P22736 598 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 NUDT2P50583 147 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC7A2P52569 658 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 VLDLRP98155 873 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 KRT72Q14CN4 511 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 TAF11Q15544 211 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC36A2Q495M3 483 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 TMEM53Q6P2H8 277 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 OFCC1Q8IZS5 231 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 ASB10Q8WXI3 467 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF75AQ96N20 296 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 DYNLRB1Q9NP97 96 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 C20orf141Q9NUB4 165 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC7A8Q9UHI5 535 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 A4GNTQ9UNA3 340 aa11.94□□□□□ -0.5
SPTLC1-207ENST00000488921 EBAG9O00559 213 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 NME4O00746 187 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 LY6HO94772 140 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF682O95780 498 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 PTHP01270 115 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 F13BP05160 661 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF35P13682 527 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ACADSP16219 412 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 USF1P22415 310 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 GLRXP35754 106 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 AQP2P41181 271 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 EVX1P49640 407 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 TRAM2Q15035 370 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 HIST3H3Q16695 136 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ANKDD1AQ495B1 522 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 IFI44LQ53G44 452 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 C6orf52Q5T4I8 152 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 LRFN4Q6PJG9 635 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 CBLL1Q75N03 491 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 SKA3Q8IX90 412 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 SVOPLQ8N434 492 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF540Q8NDQ6 660 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 MCHR2Q969V1 340 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 BPIFA2Q96DR5 249 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 NSL1Q96IY1 281 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF347Q96SE7 839 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 SEPHS2Q99611 448 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 FNDC11Q9BVV2 318 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 MRPL13Q9BYD1 178 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 SMURF2Q9HAU4 748 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 YAE1D1Q9NRH1 226 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 TAGLN3Q9UI15 199 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 HIF3AQ9Y2N7 669 aa11.93□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC22A23A1A5C7 686 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 A8MV72 311 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 TRMUO75648 421 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 SERPINA5P05154 406 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 SAGP10523 405 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 IFI30P13284 250 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 GSK3BP49841 420 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF133P52736 654 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 MXRA7P84157 204 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms