RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SMPD2O60906 423 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 UGT2B4P06133 528 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 CDKN2BP42772 138 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 SLC11A1P49279 550 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 CDH4P55283 916 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 POLR2FP61218 127 aaKnown RBP2.13□□□□□ -2.07
PTPN4-212ENST00000488896 CBX1P83916 185 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 KLHL38Q2WGJ6 581 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 CCDC92Q53HC0 331 aaPredicted RBP2.13□□□□□ -2.07
PTPN4-212ENST00000488896 PRMT9Q6P2P2 845 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 DNAJC24Q6P3W2 148 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 TRIM40Q6P9F5 258 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 DUX4L9Q6RFH8 374 aaPredicted RBP2.13□□□□□ -2.07
PTPN4-212ENST00000488896 KDM7AQ6ZMT4 941 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 ABHD13Q7L211 337 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 ZSCAN30Q86W11 494 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 OR5D13Q8NGL4 314 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 SLC38A2Q96QD8 506 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 TPPP3Q9BW30 176 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 YY1AP1Q9H869 796 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 LIN28AQ9H9Z2 209 aaKnown RBP2.13□□□□□ -2.07
PTPN4-212ENST00000488896 ISYNA1Q9NPH2 558 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 HPF1Q9NWY4 346 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 TMOD2Q9NZR1 351 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 PSG8Q9UQ74 426 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 UBIAD1Q9Y5Z9 338 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 S4R3C0 116 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 TNS2Q63HR2 1409 aa2.13□□□□□ -2.07
PTPN4-212ENST00000488896 IGLV1-50A0A075B6I6 118 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 PRKAB2O43741 272 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 PIGHQ14442 188 aaPredicted RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 SNRNP35Q16560 246 aaKnown RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 PDK4Q16654 411 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 RIPPLY2Q5TAB7 128 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 BHLHA15Q7RTS1 189 aaPredicted RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 PUSL1Q8N0Z8 303 aaKnown RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 RARRES2Q99969 163 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 SULT4A1Q9BR01 284 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 ZSCAN5AQ9BUG6 496 aa2.12□□□□□ -2.07
PTPN4-212ENST00000488896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 CARHSP1Q9Y2V2 147 aaKnown RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 MRPS18BQ9Y676 258 aaKnown RBP2.12□□□□□ -2.07
PTPN4-212ENST00000488896 RPA2P15927 270 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 ARG2P78540 354 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 CDK16Q00536 496 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 RABL6Q3YEC7 729 aaPredicted RBP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 FILIP1LQ4L180 1135 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 SMUG1Q53HV7 270 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 SPIN3Q5JUX0 258 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 CEMP1Q6PRD7 247 aaPredicted RBP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 TMEM179Q6ZVK1 233 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 ZNF557Q8N988 423 aaPredicted RBP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 MFSD9Q8NBP5 474 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 NARS2Q96I59 477 aaKnown RBP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 SORT1Q99523 831 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 MRPL37Q9BZE1 423 aaKnown RBP2.11□□□□□ -2.07
PTPN4-212ENST00000488896 SYNDIG1Q9H7V2 258 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 POLE4Q9NR33 117 aa2.11□□□□□ -2.07
PTPN4-212ENST00000488896 A0A1B0GWJ7 208 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 ZNF726A6NNF4 738 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 HLA-DPB1P04440 258 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 GNAO1P09471 354 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 ZNF806P0C7X5 589 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 OPRD1P41143 372 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 RORCP51449 518 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 HSP90AA5PQ58FG0 334 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 CEP112Q8N8E3 955 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 GATSQ8NAP1 163 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 OR4S2Q8NH73 311 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 FAM110BQ8TC76 370 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 MAGEE2Q8TD90 523 aaPredicted RBP2.1□□□□□ -2.07
PTPN4-212ENST00000488896 ABHD3Q8WU67 409 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 DTNBP1Q96EV8 351 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 SENP8Q96LD8 212 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 RBM14Q96PK6 669 aaKnown RBP2.1□□□□□ -2.07
PTPN4-212ENST00000488896 OR8B4Q96RC9 309 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 SLC35D1Q9NTN3 355 aa2.1□□□□□ -2.07
PTPN4-212ENST00000488896 ARPC3O15145 178 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 IDH1O75874 414 aaKnown RBP2.09□□□□□ -2.07
PTPN4-212ENST00000488896 CCNE2O96020 404 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 OPRK1P41145 380 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 ACAA2P42765 397 aaKnown RBP2.09□□□□□ -2.07
PTPN4-212ENST00000488896 CDKN1BP46527 198 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 IRX3P78415 501 aaPredicted RBP2.09□□□□□ -2.07
PTPN4-212ENST00000488896 MAB21L1Q13394 359 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 RGNQ15493 299 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 ZSCAN26Q16670 478 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 SAXO2Q658L1 398 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 OR4F3Q6IEY1 312 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 LRRC52Q8N7C0 313 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 GPATCH11Q8N954 259 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 OR2G2Q8NGZ5 317 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 HSFY1Q96LI6 401 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 C16orf45Q96MC5 204 aaPredicted RBP2.09□□□□□ -2.07
PTPN4-212ENST00000488896 CAMK2N2Q96S95 79 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 FAIM2Q9BWQ8 316 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 SLC25A2Q9BXI2 301 aa2.09□□□□□ -2.07
PTPN4-212ENST00000488896 RPF2Q9H7B2 306 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms