RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, human

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM1-218	ENST00000487294	LIPT2	A6NK58	231 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	AQP7P3	A6NL99	342 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TRIM77	I1YAP6	450 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SCN2B	O60939	215 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	BCAS1	O75363	584 aa	Predicted RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CRCP	O75575	148 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ZNF432	O94892	652 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SLU7	O95391	586 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	C6orf47	O95873	294 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TF	P02787	698 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	MSMB	P08118	114 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TFPI	P10646	304 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CPA3	P15088	417 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CBR1	P16152	277 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	NPR2	P20594	1047 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	FPR3	P25089	353 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SLC1A3	P43003	542 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CCT5	P48643	541 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	P2RY4	P51582	365 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CCR4	P51679	360 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TMEM33	P57088	247 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	KCNJ10	P78508	379 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SSBP2	P81877	361 aa	Predicted RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CKAP4	Q07065	602 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PTGR1	Q14914	329 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	GSTA3	Q16772	222 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SMU1	Q2TAY7	513 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SLC9B1	Q4ZJI4	515 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	HIKESHI	Q53FT3	197 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	RNASE12	Q5GAN4	147 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CFAP157	Q5JU67	520 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TYW3	Q6IPR3	259 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CASP12	Q6UXS9	341 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	FRRS1	Q6ZNA5	592 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	C6orf120	Q7Z4R8	191 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ZNF614	Q8N883	585 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OR7A2P	Q8NGA2	310 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OR9K2	Q8NGE7	335 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OR8J2	Q8NGG1	315 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OR5D16	Q8NGK9	328 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CLHC1	Q8NHS4	586 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	RFWD2	Q8NHY2	731 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	DDIT4L	Q96D03	193 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PPP3R2	Q96LZ3	170 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ZNF385A	Q96PM9	386 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SNX18	Q96RF0	628 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PRPF18	Q99633	342 aa	Known RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	KCNS3	Q9BQ31	491 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TXLNGY	Q9BZA5	131 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	METTL17	Q9H7H0	456 aa	Predicted RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	EXD2	Q9NVH0	621 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ASIC5	Q9NY37	505 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OSGIN1	Q9UJX0	560 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	MKLN1	Q9UL63	735 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	USP22	Q9UPT9	525 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294	GRIP1	Q9Y3R0	1128 aa		4.36	□□□□□ -1.71
R3HDM1-218	ENST00000487294		A0A096LPI6	279 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294		A0A0G2JK05	382 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	LOC102723971	A0A1B0GUV8	181 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	WDR91	A4D1P6	747 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	AGAP5	A6NIR3	686 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ZNF587B	E7ETH6	402 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294		J3QLI3	93 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	hCG_2039718	K7EN88	272 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	KLF11	O14901	512 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	RIPK2	O43353	540 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SYNGR3	O43761	229 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	RRP9	O43818	475 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	NPIPB7	O75200	414 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	GPI	P06744	558 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	LINC00032	P0C843	101 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	EFNA1	P20827	205 aa	Predicted RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	MATN1	P21941	496 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	RPS4Y1	P22090	263 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ACHE	P22303	614 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PEX2	P28328	305 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CALCR	P30988	508 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PRKAR1B	P31321	381 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CASQ1	P31415	396 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	THBS4	P35443	961 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	GLRX	P35754	106 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	ARR3	P36575	388 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PTDSS1	P48651	473 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	IDH2	P48735	452 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	POLR2H	P52434	150 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	CLDN8	P56748	225 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	OR2B6	P58173	313 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	UBE2N	P61088	152 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	LMO4	P61968	165 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TXNL4A	P83876	142 aa	Known RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	FUT5	Q11128	374 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	TRIP10	Q15642	601 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	GPR68	Q15743	365 aa		4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	PDCD2	Q16342	344 aa	Predicted RBP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
R3HDM1-218	ENST00000487294	MMEL1	Q495T6	779 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms