RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KLHL38Q2WGJ6 581 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 CARD16Q5EG05 197 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 KLF17Q5JT82 389 aaPredicted RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 OR2G6Q5TZ20 316 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 SPAG16Q8N0X2 631 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 FTMTQ8N4E7 242 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 ALLCQ8N6M5 410 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 BBS1Q8NFJ9 593 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 OR56B2PQ8NGI1 322 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 DYNLL2Q96FJ2 89 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 B3GALT6Q96L58 329 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 MAGEB18Q96M61 343 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 ROPN1BQ9BZX4 212 aaPredicted RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 SUDS3Q9H7L9 328 aaPredicted RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 NHEJ1Q9H9Q4 299 aaPredicted RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 FOLH1BQ9HBA9 442 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 THUMPD1Q9NXG2 353 aaKnown RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 BFARQ9NZS9 450 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 IL17CQ9P0M4 197 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 RABL2AQ9UBK7 228 aaPredicted RBP3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 IFT52Q9Y366 437 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 UGT2A1Q9Y4X1 527 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 CACNA1HO95180 2353 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 CHD6Q8TD26 2715 aa3.54□□□□□ -1.84
PRPF38A-203ENST00000487160 MAP1BP46821 2468 aaKnown RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 GVINP1Q7Z2Y8 2422 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 MIA3Q5JRA6 1907 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 IQANK1A0A1B0GTG1 560 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 ARHGEF35A5YM69 484 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 BTBD17A6NE02 478 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 A8MXQ7 604 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 UGT1A9O60656 530 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 CLDN9O95484 217 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OXSR1O95747 527 aaPredicted RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 SERPINA3P01011 423 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 ATP6V1B2P21281 511 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 DDOSTP39656 456 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 RGRP47804 291 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 CRYBB1P53674 252 aaPredicted RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 CSNK1G2P78368 415 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 CDK16Q00536 496 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 NDPQ00604 133 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 PLD1Q13393 1074 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OXA1LQ15070 435 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 FILIP1LQ4L180 1135 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OR52E8Q6IFG1 317 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 PGAP1Q75T13 922 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 GDPD3Q7L5L3 318 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OR2AP1Q8NGE2 309 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 SDR42E1Q8WUS8 393 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OR1E3Q8WZA6 343 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 CXorf40BQ96DE9 158 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 PAGE5Q96GU1 130 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 OXGR1Q96P68 337 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 ARHGDIGQ99819 225 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 EBF4Q9BQW3 602 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 RIOK1Q9BRS2 568 aaKnown RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 TRIM62Q9BVG3 475 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 TREM2Q9NZC2 230 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 ZNF639Q9UID6 485 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 KIF25Q9UIL4 384 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 KIF25-AS1Q9Y6Z4 181 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 V9GY05 133 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 RIF1Q5UIP0 2472 aaKnown RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 PATJQ8NI35 1801 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 USP24Q9UPU5 2620 aa3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 PTPRZ1P23471 2315 aaPredicted RBP3.53□□□□□ -1.84
PRPF38A-203ENST00000487160 C2orf16Q68DN1 1984 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 FAM240BA0A1B0GVZ2 78 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 OR52A4PA6NMU1 304 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 LOC730098B7Z3J9 87 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 GFYI3L273 518 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 HSD17B6O14756 317 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 KLHL41O60662 606 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 CD1EP15812 388 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 GDI1P31150 447 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 SHMT2P34897 504 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 RBMXP38159 391 aaKnown RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 RPL23AP62750 156 aaKnown RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 BST1Q10588 318 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 ASPHQ12797 758 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 CUL2Q13617 745 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 KCTD21Q4G0X4 260 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 BCL7AQ4VC05 210 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 RSBN1Q5VWQ0 802 aaPredicted RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 HSDL2Q6YN16 418 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 SCARA5Q6ZMJ2 495 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 ECHDC2Q86YB7 292 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 TGIF2LYQ8IUE0 185 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 MYOCDQ8IZQ8 938 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 FAM83FQ8NEG4 500 aaPredicted RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 UFD1Q92890 307 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms