RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ASCL5Q7RTU5 278 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 C6orf120Q7Z4R8 191 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 MS4A15Q8N5U1 240 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF433Q8N7K0 673 aaPredicted RBP2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 MDS2Q8NDY4 140 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 OR51G1Q8NGK1 321 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 RNF185Q96GF1 192 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 SH3GL3Q99963 347 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 CENPKQ9BS16 269 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 OSBPL10Q9BXB5 764 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 FAM107BQ9H098 131 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 UGT1A7Q9HAW7 530 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 UGT1A10Q9HAW8 530 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 UGT1A8Q9HAW9 530 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 MED4Q9NPJ6 270 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 CTPS2Q9NRF8 586 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 DEC1Q9P2X7 70 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 PCYOX1Q9UHG3 505 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 CTNNA3Q9UI47 895 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 PRG3Q9Y2Y8 225 aaPredicted RBP2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 SCAPERQ9BY12 1400 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 SCRIBQ14160 1630 aa2.31□□□□□ -2.04
SNRNP27-204ENST00000487029 TRBV6-6A0A0A6YYG2 114 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 A0A0B4J2A0 478 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 IGHV3-64DA0A0J9YX35 117 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 A0A1B0GVI7 797 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF726A6NNF4 738 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 LAD1O00515 517 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 PPP1R2P9O14990 202 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 RNF13O43567 381 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 FGGP02679 453 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 PRB2P02812 416 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 PCCAP05165 728 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SMIM10L1P0DMW3 83 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 NMUP48645 174 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 RORCP51449 518 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 CDH6P55285 790 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 TPM4P67936 248 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 BEX3Q00994 111 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SMARCB1Q12824 385 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SRSF5Q13243 272 aaKnown RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SYCP1Q15431 976 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 GUCA2BQ16661 112 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 PIGGQ5H8A4 983 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM255AQ5JRV8 349 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 VAX1Q5SQQ9 334 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 RAET1LQ5VY80 246 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 IGFL2Q6UWQ7 119 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF836Q6ZNA1 936 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 EID2Q8N6I1 236 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 ARIH2OSQ8N7S6 290 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 OR7G2Q8NG99 324 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 RHEBL1Q8TAI7 183 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 GEMIN6Q8WXD5 167 aaKnown RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 TMEM54Q969K7 222 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 ASB9Q96DX5 294 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 AURKBQ96GD4 344 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SMIM10Q96HG1 83 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 DNTTIP1Q9H147 329 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 DMAP1Q9NPF5 467 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 STOX2Q9P2F5 926 aaPredicted RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SHPKQ9UHJ6 478 aa2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 SMG6Q86US8 1419 aaKnown RBP2.3□□□□□ -2.04
SNRNP27-204ENST00000487029 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 LTBP1Q14766 1721 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 NACADO15069 1562 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 PEG3Q9GZU2 1588 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 NCAPD3P42695 1498 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 USP47Q96K76 1375 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 IBTKQ9P2D0 1353 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SMCO3A2RU48 225 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 PRSS37A4D1T9 235 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 C9JVG2 144 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SUPT3HO75486 399 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC25A27O95847 323 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 AGTP01019 485 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 PABPC4LP0CB38 370 aaKnown RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ADRB3P13945 408 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 ZNF24P17028 368 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CNR1P21554 472 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SERPINB5P36952 375 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 NSG1P42857 185 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SSR4P51571 173 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CCNHP51946 323 aaPredicted RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CRISP3P54108 245 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 YWHAGP61981 247 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 RPS21P63220 83 aaKnown RBP2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CUL2Q13617 745 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 PRAMEF20Q5VT98 475 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 CARD17Q5XLA6 110 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 AP1ARQ63HQ0 302 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 SLC8B1Q6J4K2 584 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 Q6ZSR3 168 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 TTC5Q8N0Z6 440 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 PDIK1LQ8N165 341 aa2.29□□□□□ -2.04
SNRNP27-204ENST00000487029 BBS5Q8N3I7 341 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms