RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 PGA3P0DJD8 388 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ACADSP16219 412 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 CD53P19397 219 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 IFNGR2P38484 337 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 OMPP47874 163 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 CTXN1P60606 82 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 RPS4XP62701 263 aaKnown RBP10.88□□□□□ -0.67
HMG20B-211ENST00000486028 CHRNB3Q05901 458 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 SEC23BQ15437 767 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF672Q499Z4 452 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-211ENST00000486028 FAM98BQ52LJ0 330 aaKnown RBP10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ARMC4Q5T2S8 1044 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF611Q8N823 705 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 PIGTQ969N2 578 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
HMG20B-211ENST00000486028 ALPK1Q96QP1 1244 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 FUZQ9BT04 418 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
HMG20B-211ENST00000486028 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 A6NIZ1 184 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 DHHO43323 396 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 QDPRP09417 244 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RRM2P31350 389 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RPL4P36578 427 aaKnown RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 LIMS1P48059 325 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 ART1P52961 327 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RAP1BP61224 184 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RPL27P61353 136 aaKnown RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RAP1AP62834 184 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 RUNX1T1Q06455 604 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 TOP3AQ13472 1001 aaPredicted RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 FHL1Q13642 323 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 HIST3H3Q16695 136 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 DEFB113Q30KQ7 82 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 PGM2L1Q6PCE3 622 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 SLC22A25Q6T423 547 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF813Q6ZN06 617 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 IGFN1Q86VF2 1251 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 FAM169BQ8N8A8 192 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 LRRC75AQ8NAA5 344 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 SYT14Q8NB59 555 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 CCL19Q99731 98 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 FOXB1Q99853 325 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 FOXC2Q99958 501 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF346Q9UL40 294 aaKnown RBP10.87□□□□□ -0.67
HMG20B-211ENST00000486028 CSMD2Q7Z408 3487 aa10.87□□□□□ -0.67
HMG20B-211ENST00000486028 UNC119BA6NIH7 251 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 SHISA9B4DS77 424 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 TNFRSF11BO00300 401 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 OR10H3O60404 316 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 PTP4A3O75365 173 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 SEC14L2O76054 403 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 IGHMP01871 453 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 CD14P08571 375 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 NR2C1P13056 603 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 CBR1P16152 277 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 HOXB6P17509 224 aaKnown RBP10.86□□□□□ -0.67
HMG20B-211ENST00000486028 ACVR1BP36896 505 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 MAGEA2P43356 314 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 CAPZA2P47755 286 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF84P51523 738 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 HMGA2P52926 109 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 TUBA1BP68363 451 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 TUBA4AP68366 448 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 TUBA1AQ71U36 451 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 ARIH2OSQ8N7S6 290 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 NOXO1Q8NFA2 376 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 KBTBD8Q8NFY9 601 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 FNDC8Q8TC99 324 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
HMG20B-211ENST00000486028 FBXW5Q969U6 566 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 MCHR2Q969V1 340 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 SLC38A2Q96QD8 506 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 RBP7Q96R05 134 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 KCNS3Q9BQ31 491 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 ALG12Q9BV10 488 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 CISD1Q9NZ45 108 aaKnown RBP10.86□□□□□ -0.67
HMG20B-211ENST00000486028 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
HMG20B-211ENST00000486028 GRHPRQ9UBQ7 328 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 POU2F3Q9UKI9 436 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 SIGLEC7Q9Y286 467 aa10.86□□□□□ -0.67
HMG20B-211ENST00000486028 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 GSC2O15499 205 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 AHCYL1O43865 530 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 TMCC2O75069 709 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 NDUFB2O95178 105 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 FARS2O95363 451 aaKnown RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 HLA-HP01893 362 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms