RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RGS7BPQ6MZT1 257 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-205ENST00000485397 GLCCI1Q86VQ1 547 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 THOC1Q96FV9 657 aaKnown RBP16.48■□□□□ 0.23
COL27A1-205ENST00000485397 SLC25A44Q96H78 314 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-205ENST00000485397 OR51B6Q9H340 312 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 NANSQ9NR45 359 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 TREM2Q9NZC2 230 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 TAAR3PQ9P1P4 343 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 METRNQ9UJH8 293 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 SLC7A7Q9UM01 511 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 NDUFAF1Q9Y375 327 aa16.48■□□□□ 0.23
COL27A1-205ENST00000485397 TRAPPC13A5PLN9 417 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 QDPRP09417 244 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 PGA4P0DJD7 388 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 PGA3P0DJD8 388 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 PCMT1P22061 227 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 MAGEB1P43366 347 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 TMEM33P57088 247 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 ERVS71-1P61550 626 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 REP15Q6BDI9 236 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 DPP10Q8N608 796 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 SLC30A7Q8NEW0 376 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 OR4K5Q8NGD3 323 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 TAMM41Q96BW9 452 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 TSPAN32Q96QS1 320 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 RABEP2Q9H5N1 569 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 OCEL1Q9H607 264 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 METTL17Q9H7H0 456 aaPredicted RBP16.47■□□□□ 0.23
COL27A1-205ENST00000485397 RNF121Q9H920 327 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 HIF1ANQ9NWT6 349 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF229Q9UJW7 825 aa16.47■□□□□ 0.23
COL27A1-205ENST00000485397 PPIHO43447 177 aaKnown RBP16.46■□□□□ 0.23
COL27A1-205ENST00000485397 RP2O75695 350 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 HIST1H2ABP04908 130 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 ASAH2BP0C7U1 165 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 UMPSP11172 480 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 RUNX1T1Q06455 604 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 NKPD1Q17RQ9 610 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 TTMPQ5BVD1 217 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 HIST3H2AQ7L7L0 130 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-205ENST00000485397 DYDC1Q8WWB3 177 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 HIST1H2ACQ93077 130 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 TMEM186Q96B77 213 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF347Q96SE7 839 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF426Q9BUY5 554 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 KAT8Q9H7Z6 458 aaKnown RBP16.46■□□□□ 0.23
COL27A1-205ENST00000485397 CDH20Q9HBT6 801 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 ZNF346Q9UL40 294 aaKnown RBP16.46■□□□□ 0.23
COL27A1-205ENST00000485397 NBEAL1Q6ZS30 2694 aa16.46■□□□□ 0.23
COL27A1-205ENST00000485397 ANGPT2O15123 496 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 VENTXO95231 258 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 FARS2O95363 451 aaKnown RBP16.45■□□□□ 0.22
COL27A1-205ENST00000485397 BCL10O95999 233 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 TFP02787 698 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 GAAP10253 952 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 LMO4P61968 165 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 MRPS11P82912 194 aaKnown RBP16.45■□□□□ 0.22
COL27A1-205ENST00000485397 MYBPC1Q00872 1141 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 TMEM53Q6P2H8 277 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 PATL1Q86TB9 770 aaKnown RBP16.45■□□□□ 0.22
COL27A1-205ENST00000485397 OR10A6Q8NH74 314 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 MCHR2Q969V1 340 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 MPP4Q96JB8 637 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 ATP6V1G3Q96LB4 118 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
COL27A1-205ENST00000485397 MEPEQ9NQ76 525 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-205ENST00000485397 SLC22A23A1A5C7 686 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 C17orf100A8MU93 164 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 BLOC1S5-TXNDC5H3BN57 136 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 CDC14BO60729 498 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 ENTPD5O75356 428 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 IGHG1P01857 330 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 LCKP06239 509 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 MSMBP08118 114 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 PCGF2P35227 344 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 CRYBA2P53672 197 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 CLRN1P58418 232 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 NFYCQ13952 458 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 SLC16A14Q7RTX9 510 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 NANOGNBQ7Z5D8 188 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 MEX3DQ86XN8 651 aaKnown RBP16.44■□□□□ 0.22
COL27A1-205ENST00000485397 SYNPRQ8TBG9 265 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 SLC26A7Q8TE54 656 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 LRRC37BQ96QE4 947 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF416Q9BWM5 594 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 SLC19A3Q9BZV2 496 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 PCDHAC1Q9H158 963 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 HINT3Q9NQE9 182 aaKnown RBP16.44■□□□□ 0.22
COL27A1-205ENST00000485397 GRIP1Q9Y3R0 1128 aa16.44■□□□□ 0.22
COL27A1-205ENST00000485397 IGLV3-9A0A075B6K5 115 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 F13BP05160 661 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 ZNF250P15622 560 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 GZMMP51124 257 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 KLF3P57682 345 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-205ENST00000485397 SELENOVP59797 346 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 CCL8P80075 99 aa16.43■□□□□ 0.22
COL27A1-205ENST00000485397 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
COL27A1-205ENST00000485397 HIST3H3Q16695 136 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms