RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RBM34P42696 430 aaKnown RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 SELENOPP49908 381 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 EFNA4P52798 201 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ARFIP2P53365 341 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CLDN17P56750 224 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 RPS23P62266 143 aaKnown RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 HOXC5Q00444 222 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 EGR4Q05215 589 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 DMTNQ08495 405 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TNK1Q13470 666 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TBRG1Q3YBR2 411 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 NRN1LQ496H8 165 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TTC33Q6PID6 262 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CCDC80Q76M96 950 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF627Q7L945 461 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 NUP37Q8NFH4 326 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 OR5J2Q8NH18 312 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 LZICQ8WZA0 190 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 TAAR8Q969N4 342 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 MCHR1Q99705 422 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 PCDHAC1Q9H158 963 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF385DQ9H6B1 395 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 NANSQ9NR45 359 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 NPAP1Q9NZP6 1156 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 CRNNQ9UBG3 495 aaPredicted RBP5.37□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF229Q9UJW7 825 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 USP22Q9UPT9 525 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 COL6A5A8TX70 2615 aa5.37□□□□□ -1.55
PTCD3-215ENST00000484203 IGKV1D-42A0A075B6H8 117 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 SLC22A23A1A5C7 686 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 PLPP3O14495 311 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 TRAF3IP2O43734 574 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CCDC22O60826 627 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 FARS2O95363 451 aaKnown RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 PTHP01270 115 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 IFNA2P01563 188 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 IGKV3-15P01624 115 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 IGLV1-44P01699 117 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CD8AP01732 235 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 IGHV4-39P01824 125 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 AHCYP23526 432 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 HTR2AP28223 471 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 THBS2P35442 1172 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CDKN1AP38936 164 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 EVX1P49640 407 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CDH12P55289 794 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 MTPNP58546 118 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 SELENOVP59797 346 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 POU3F1Q03052 451 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 ZP4Q12836 540 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 TAF11Q15544 211 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 EFNB3Q15768 340 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 HIKESHIQ53FT3 197 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 C9orf135Q5VTT2 229 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CD276Q5ZPR3 534 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 REP15Q6BDI9 236 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 NANOGP8Q6NSW7 305 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 UGT2A3Q6UWM9 527 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 UNQ6126/PRO20091Q6UXV3 157 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 PIWIL3Q7Z3Z3 882 aaKnown RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 PTOV1Q86YD1 416 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 C20orf196Q8IYI0 205 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 TMEM123Q8N131 208 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 OR10H5Q8NGA6 315 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 OR6N1Q8NGY5 312 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 OR10A6Q8NH74 314 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 OR6X1Q8NH79 312 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 FNDC8Q8TC99 324 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 LRRC58Q96CX6 371 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 DNAJA3Q96EY1 480 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 ALKBH3Q96Q83 286 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 OR2M2Q96R28 347 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 ARHGDIGQ99819 225 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 C1QTNF6Q9BXI9 259 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 TMEM120AQ9BXJ8 343 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CACNG6Q9BXT2 260 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 ULBP2Q9BZM5 246 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 NDEL1Q9GZM8 345 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 RAB1BQ9H0U4 201 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 C1orf198Q9H425 327 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 IKZF5Q9H5V7 419 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CCDC134Q9H6E4 229 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF442Q9H7R0 627 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 NANOGQ9H9S0 305 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CRLF2Q9HC73 371 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 GPR35Q9HC97 309 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CA10Q9NS85 328 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 B3GAT1Q9P2W7 334 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 POFUT2Q9Y2G5 429 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 TMA7Q9Y2S6 64 aaKnown RBP5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CAPN7Q9Y6W3 813 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 CADP27708 2225 aa5.36□□□□□ -1.55
PTCD3-215ENST00000484203 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 PLCE1Q9P212 2302 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 NUP214P35658 2090 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-215ENST00000484203 KIAA1549Q9HCM3 1950 aa5.35□□□□□ -1.55
PTCD3-215ENST00000484203 LOC390937A0A1W2PQ73 354 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms