RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	PCSK6	P29122	969 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	PTH2R	P49190	550 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	DAP	P51397	102 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	ERVK-25	P63136	954 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	TSC22D1	Q15714	1073 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	RFX4	Q33E94	735 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	CARD17	Q5XLA6	110 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	FBXW9	Q5XUX1	488 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	FAHD1	Q6P587	224 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	SMARCD3	Q6STE5	483 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	KLHL17	Q6TDP4	642 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	CD300LD	Q6UXZ3	194 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	STAC2	Q6ZMT1	411 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	FAM122B	Q7Z309	247 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	WFDC8	Q8IUA0	241 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	C20orf196	Q8IYI0	205 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR6X1	Q8NH79	312 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	ZNF519	Q8TB69	540 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	HDAC2	Q92769	488 aa	Known RBP	13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	SAMD8	Q96LT4	415 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	GPX7	Q96SL4	187 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	KATNB1	Q9BVA0	655 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	MRPL13	Q9BYD1	178 aa	Known RBP	13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	PLA2G12A	Q9BZM1	189 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	LINC00470	Q9BZP3	86 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	SLCO5A1	Q9H2Y9	848 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	VCX3B	Q9H321	246 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	OR52D1	Q9H346	318 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	TXNIP	Q9H3M7	391 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	NRIP3	Q9NQ35	241 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	PARPBP	Q9NWS1	579 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	REV1	Q9UBZ9	1251 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	ADAM18	Q9Y3Q7	739 aa		13.09	□□□□□ -0.31
NR1H3-222	ENST00000483882	ABCA2	Q9BZC7	2435 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	NPIPB13	A6NJU9	1138 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	NPIPB4	C9JG80	1138 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	BCL10	O95999	233 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	CD14	P08571	375 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	ITGA5	P08648	1049 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	PGA4	P0DJD7	388 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	PGA3	P0DJD8	388 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	PRPS1	P60891	318 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	CAMK2D	Q13557	499 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	ALKBH2	Q6NS38	261 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882		Q6ZT83	130 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	RASSF6	Q6ZTQ3	369 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	BEND4	Q6ZU67	534 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	STK32C	Q86UX6	486 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	TMEM171	Q8WVE6	324 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	TMEM54	Q969K7	222 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	NMD3	Q96D46	503 aa	Known RBP	13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	ZNF837	Q96EG3	531 aa	Predicted RBP	13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882		Q96M85	177 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	GSX2	Q9BZM3	304 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	ACTR6	Q9GZN1	396 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	SMURF2	Q9HAU4	748 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	IL20	Q9NYY1	176 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882	MALT1	Q9UDY8	824 aa		13.08	□□□□□ -0.32
NR1H3-222	ENST00000483882		A0A1W2PRG6	482 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	SAC3D1	A6NKF1	404 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	IMPA2	O14732	288 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	SLC43A1	O75387	559 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	TRMU	O75648	421 aa	Known RBP	13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	SOX14	O95416	240 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	PLAU	P00749	431 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	ACADS	P16219	412 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	COX5A	P20674	150 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	RPL27	P61353	136 aa	Known RBP	13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	FAP	Q12884	760 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	TOP3A	Q13472	1001 aa	Predicted RBP	13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	LRFN4	Q6PJG9	635 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	CLDN22	Q8N7P3	220 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	FANK1	Q8TC84	345 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	PLPPR2	Q96GM1	343 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	SLC25A44	Q96H78	314 aa	Predicted RBP	13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	KCNK17	Q96T54	332 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	GABARAPL1	Q9H0R8	117 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	OAZ3	Q9UMX2	235 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	LRRC42	Q9Y546	428 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	IER3IP1	Q9Y5U9	82 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	CDH10	Q9Y6N8	788 aa		13.07	□□□□□ -0.32
NR1H3-222	ENST00000483882	IGKV1D-43	A0A0B4J1Z2	117 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	ZNF726	A6NNF4	738 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882		G3V2T6	193 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	MITF	O75030	526 aa	Predicted RBP	13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	CNOT4	O95628	575 aa	Known RBP	13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	PPP1R3D	O95685	299 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	TXNDC12	O95881	172 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	ANXA8	P13928	327 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	ZNF23	P17027	643 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	PSMB1	P20618	241 aa	Known RBP	13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	RPL4	P36578	427 aa	Known RBP	13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	ACVR1B	P36896	505 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	DAP3	P51398	398 aa	Known RBP	13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	NR1H2	P55055	460 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	COX10	Q12887	443 aa		13.06	□□□□□ -0.32
NR1H3-222	ENST00000483882	TRIP10	Q15642	601 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms