RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 KATNB1Q9BVA0 655 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 DENND2DQ9H6A0 471 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 SMURF2Q9HAU4 748 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 KRCC1Q9NPI7 259 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF701Q9NV72 531 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 TMEM38BQ9NVV0 291 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 CISD1Q9NZ45 108 aaKnown RBP15.68■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF224Q9NZL3 707 aa15.68■□□□□ 0.1
HDAC6-225ENST00000483506 OVOL3O00110 214 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 ACOT8O14734 319 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SMPD2O60906 423 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SEC14L2O76054 403 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 GADD45GO95257 159 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SOD3P08294 240 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 QDPRP09417 244 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 NR2C1P13056 603 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 B4GALT1P15291 398 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF26P17031 533 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-225ENST00000483506 ARR3P36575 388 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 HMGA2P52926 109 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 CTXN1P60606 82 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SPIBQ01892 262 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 TRAP1Q12931 704 aaKnown RBP15.67■□□□□ 0.1
HDAC6-225ENST00000483506 PGM2L1Q6PCE3 622 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SLC22A25Q6T423 547 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 B3GLCTQ6Y288 498 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 KRTAP1-3Q8IUG1 177 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 DEPDC4Q8N2C3 294 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 OR52J3Q8NH60 311 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF519Q8TB69 540 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 TMEM171Q8WVE6 324 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 HDAC2Q92769 488 aaKnown RBP15.67■□□□□ 0.1
HDAC6-225ENST00000483506 CLPTM1LQ96KA5 538 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 TSPAN32Q96QS1 320 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 THTPAQ9BU02 230 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 GSX2Q9BZM3 304 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 SIGLEC7Q9Y286 467 aa15.67■□□□□ 0.1
HDAC6-225ENST00000483506 USF3Q68DE3 2245 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 E7EQL1 145 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 ENTPD5O75356 428 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 KRT36O76013 467 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 CD14P08571 375 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 CECR9P0C854 216 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 RRM2P31350 389 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF544Q6NX49 715 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 MDP1Q86V88 176 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 FNDC8Q8TC99 324 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 NANOS1Q8WY41 292 aaKnown RBP15.66■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF75AQ96N20 296 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 DHRS9Q9BPW9 319 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 CXorf56Q9H5V9 222 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 FAIMQ9NVQ4 179 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 ZNF346Q9UL40 294 aaKnown RBP15.66■□□□□ 0.1
HDAC6-225ENST00000483506 LAMP3Q9UQV4 416 aa15.66■□□□□ 0.1
HDAC6-225ENST00000483506 TEP1Q99973 2627 aaKnown RBP15.66■□□□□ 0.1
HDAC6-225ENST00000483506 FLNAP21333 2647 aaKnown RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 A6NIZ1 184 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 ATP6V1G2-DDX39BF2Z307 99 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 GYG2O15488 501 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 MGRN1O60291 552 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 HLA-HP01893 362 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 FXYD6P3P58550 94 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 RAP1BP61224 184 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 RAP1AP62834 184 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 NAAAQ02083 359 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 BNIP1Q12981 228 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 TOP3AQ13472 1001 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 GSG1Q2KHT4 349 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 PRSS57Q6UWY2 283 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 FAM122BQ7Z309 247 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 ZER1Q7Z7L7 766 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 MYPOPQ86VE0 399 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 IGFN1Q86VF2 1251 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 SLC22A24Q8N4F4 322 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 ARIH2OSQ8N7S6 290 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 SYT14Q8NB59 555 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 CCDC124Q96CT7 223 aaKnown RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 RSRC1Q96IZ7 334 aaKnown RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 GPA33Q99795 319 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 BTBD10Q9BSF8 475 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 TRAF4Q9BUZ4 470 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-225ENST00000483506 NDEL1Q9GZM8 345 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 AURKCQ9UQB9 309 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 LYVE1Q9Y5Y7 322 aa15.65■□□□□ 0.1
HDAC6-225ENST00000483506 AQP12BA6NM10 295 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 UBL3O95164 117 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 NDUFB2O95178 105 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 CD8AP01732 235 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 CRYAAP02489 173 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 CELA3BP08861 270 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 OR8G3PP0DMU2 310 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 FPR3P25089 353 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 TTKP33981 857 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 ACVR1BP36896 505 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 PTH2RP49190 550 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 ZNF84P51523 738 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 IDH3GP51553 393 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-225ENST00000483506 ADAM8P78325 824 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 THEM4Q5T1C6 240 aa15.64■□□□□ 0.09
HDAC6-225ENST00000483506 SHEQ5VZ18 495 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms