RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TUBA1AQ71U36 451 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 ZER1Q7Z7L7 766 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 LINC00471Q8N535 108 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 GNPDA2Q8TDQ7 276 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 CANT1Q8WVQ1 401 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 AKAP1Q92667 903 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNX4-205ENST00000482965 HDAC2Q92769 488 aaKnown RBP7.67□□□□□ -1.18
SNX4-205ENST00000482965 MCHR2Q969V1 340 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 TSPAN32Q96QS1 320 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 FOXB1Q99853 325 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 ALG12Q9BV10 488 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 KATNB1Q9BVA0 655 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 CHID1Q9BWS9 393 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 LRMDAQ9H2I8 198 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 MMADHCQ9H3L0 296 aaPredicted RBP7.67□□□□□ -1.18
SNX4-205ENST00000482965 REEP1Q9H902 201 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 SLC7A8Q9UHI5 535 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 ITGB1BP2Q9UKP3 347 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 ZNF346Q9UL40 294 aaKnown RBP7.67□□□□□ -1.18
SNX4-205ENST00000482965 MGAT4BQ9UQ53 548 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 SIGLEC7Q9Y286 467 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 SAMHD1Q9Y3Z3 626 aaKnown RBP7.67□□□□□ -1.18
SNX4-205ENST00000482965 FBN2P35556 2912 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 ARID1AO14497 2285 aa7.67□□□□□ -1.18
SNX4-205ENST00000482965 DCHS2Q6V1P9 2916 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 MYO9AB2RTY4 2548 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 TCRBV3S1A0A5B6 114 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 XKRYO14609 159 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 GNGT2O14610 69 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 HS3ST1O14792 307 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ENTPD5O75356 428 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 PTP4A3O75365 173 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 CCNB2O95067 398 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 FARS2O95363 451 aaKnown RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 CST1P01037 141 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 CD79AP11912 226 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 B4GALT1P15291 398 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 FPR3P25089 353 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 CD40P25942 277 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ERFP50548 548 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 HMGA2P52926 109 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 PPP1R8Q12972 351 aaKnown RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 C1orf94Q6P1W5 598 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 PGBD2Q6P3X8 592 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 SMARCD3Q6STE5 483 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 C20orf204Q6ZNR8 217 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 CCDC36Q8IYA8 594 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 DEPDC4Q8N2C3 294 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ARIH2OSQ8N7S6 290 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 KBTBD8Q8NFY9 601 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 OR9Q2Q8NGE9 314 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 OR4C15Q8NGM1 316 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ZNF519Q8TB69 540 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 FANK1Q8TC84 345 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 NINJ1Q92982 152 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ZNF570Q96NI8 536 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 RBP7Q96R05 134 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 GPA33Q99795 319 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 KCNS3Q9BQ31 491 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 MRPL13Q9BYD1 178 aaKnown RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 YY1AP1Q9H869 796 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 MOV10Q9HCE1 1003 aaKnown RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 CCM2LQ9NUG4 571 aaPredicted RBP7.66□□□□□ -1.18
SNX4-205ENST00000482965 VNN3Q9NY84 501 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 GRHPRQ9UBQ7 328 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 POU2F3Q9UKI9 436 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 ADAM18Q9Y3Q7 739 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 U3KQV3 271 aa7.66□□□□□ -1.18
SNX4-205ENST00000482965 IGHV1-18A0A0C4DH31 117 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 TEX13CA0A0J9YWL9 993 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 H7C1C5 153 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 EBAG9O00559 213 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 ARHGEF9O43307 516 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 FKBP6O75344 327 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 CIB2O75838 187 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 ATE1O95260 518 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 SLC2A10O95528 541 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 HLA-HP01893 362 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 CBR1P16152 277 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 ZNF26P17031 533 aaPredicted RBP7.65□□□□□ -1.18
SNX4-205ENST00000482965 SLC6A6P31641 620 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 GSSP48637 474 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 IDH3GP51553 393 aaPredicted RBP7.65□□□□□ -1.18
SNX4-205ENST00000482965 RPS6KA3P51812 740 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 IST1P53990 364 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 CDH11P55287 796 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 LCN6P62502 163 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 FMODQ06828 376 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 SPOCK1Q08629 439 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 NPRL3Q12980 569 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 TSPAN31Q12999 210 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 KRR1Q13601 381 aaKnown RBP7.65□□□□□ -1.18
SNX4-205ENST00000482965 GK3PQ14409 553 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 HIST3H3Q16695 136 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 ZNF672Q499Z4 452 aaPredicted RBP7.65□□□□□ -1.18
SNX4-205ENST00000482965 THEM4Q5T1C6 240 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 C10orf128Q5T292 105 aa7.65□□□□□ -1.18
SNX4-205ENST00000482965 C1orf146Q5VVC0 180 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms