RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NDNFQ8TB73 568 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 AGAP11Q8TF27 550 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 CA5BP1Q8WTZ4 195 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 PHF10Q8WUB8 498 aaKnown RBP5.77□□□□□ -1.49
CLK1-212ENST00000482590 SLC44A1Q8WWI5 657 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 NDNQ99608 321 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 PARVBQ9HBI1 364 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 GAR1Q9NY12 217 aaKnown RBP5.77□□□□□ -1.49
CLK1-212ENST00000482590 TAS2R13Q9NYV9 303 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 GAGE2DQ9UEU5 116 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 FBXO5Q9UKT4 447 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 PDE10AQ9Y233 779 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 KLF13Q9Y2Y9 288 aaPredicted RBP5.77□□□□□ -1.49
CLK1-212ENST00000482590 SLC22A7Q9Y694 548 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 HIVEP1P15822 2718 aa5.77□□□□□ -1.49
CLK1-212ENST00000482590 TRAV24A0A0B4J272 114 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 A0A1W2PPV4 95 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 METTL21EPA6NDL7 271 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SAGE2PA6NJ88 616 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CD8B2A6NJW9 211 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 NPIPA2E9PIF3 369 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 KLRC4-KLRK1H3BQV0 150 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 C19orf84I3L1E1 186 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 OR1F1O43749 312 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SCO2O43819 266 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CDC40O60508 579 aaKnown RBP eCLIP5.76□□□□□ -1.49
CLK1-212ENST00000482590 GALR3O60755 368 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 NEURL1O76050 574 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 MBP02144 154 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 PCMT1P22061 227 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CYB561P49447 251 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 MMP15P51511 669 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CCNG1P51959 295 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 P2RX3P56373 397 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 AP1S2P56377 157 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 RGS8P57771 180 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 RAB11AP62491 216 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 TLE4Q04727 773 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SLC3A1Q07837 685 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ILF2Q12905 390 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 RAB11BQ15907 218 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 KCTD19Q17RG1 926 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 TMEM44Q2T9K0 475 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ALKBH6Q3KRA9 238 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 DEFB134Q4QY38 66 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 GGNBP1Q5YKI7 109 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 AWAT2Q6E213 333 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 TMEM225Q6GV28 225 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 KRTAP5-11Q6L8G4 156 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 METTL2BQ6P1Q9 378 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 TTC27Q6P3X3 843 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CCDC137Q6PK04 289 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 CYHR1Q6ZMK1 362 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 NCCRP1Q6ZVX7 275 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 TMPRSS11FQ6ZWK6 438 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SPATA6LQ8N4H0 392 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 KIF2BQ8N4N8 673 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 CPSF7Q8N684 471 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 ZNF740Q8NDX6 193 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 OR5T3Q8NGG3 340 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 RP9Q8TA86 221 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 FAM76AQ8TAV0 307 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ZNF596Q8TC21 504 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 UBTD2Q8WUN7 234 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SPRYD4Q8WW59 207 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 PIGCQ92535 297 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 PHYHIPQ92561 330 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 MAGOHBQ96A72 148 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 PYCR2Q96C36 320 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 TM4SF19Q96DZ7 209 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 SENP5Q96HI0 755 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 METTL2AQ96IZ6 378 aaKnown RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 ZNF582Q96NG8 517 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 TSSK2Q96PF2 358 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 GATA5Q9BWX5 397 aaPredicted RBP5.76□□□□□ -1.49
CLK1-212ENST00000482590 DEFB126Q9BYW3 111 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 Q9N2K0 584 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 MAN2C1Q9NTJ4 1040 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ZDHHC18Q9NUE0 388 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 EMC3Q9P0I2 261 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 P2RX2Q9UBL9 471 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ZNF835Q9Y2P0 537 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 NINQ8N4C6 2090 aa5.76□□□□□ -1.49
CLK1-212ENST00000482590 ANKHD1Q8IWZ3 2542 aaKnown RBP5.75□□□□□ -1.49
CLK1-212ENST00000482590 TRBV11-1A0A0K0K1C0 115 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 RNF222A6NCQ9 220 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 SNTNA6NMZ2 147 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 A8MUA0 341 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 PGRMC1O00264 195 aaKnown RBP5.75□□□□□ -1.49
CLK1-212ENST00000482590 CHEK1O14757 476 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 CHST10O43529 356 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 RNH1P13489 461 aaKnown RBP5.75□□□□□ -1.49
CLK1-212ENST00000482590 NDUFB7P17568 137 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 MAOAP21397 527 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 RAB8AP61006 207 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 REEP5Q00765 189 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 BDH1Q02338 343 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 UBE2V1Q13404 147 aa5.75□□□□□ -1.49
CLK1-212ENST00000482590 KEAP1Q14145 624 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms