RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 OR8G3PP0DMU2 310 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 NR2C1P13056 603 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 NCK1P16333 377 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 PPOXP50336 477 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 PDLIM4P50479 330 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 PSME3P61289 254 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 RPS23P62266 143 aaKnown RBP13.58□□□□□ -0.24
COL16A1-212ENST00000482478 RAB1AP62820 205 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 HGFACQ04756 655 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 KRTAP1-1Q07627 177 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 TRAM2Q15035 370 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 NHLRC1Q6VVB1 395 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF730Q6ZMV8 503 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 CPLX4Q7Z7G2 160 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 CYP4Z1Q86W10 505 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 SLC22A24Q8N4F4 322 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 IL17RDQ8NFM7 739 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 BPIFA2Q96DR5 249 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 RNF121Q9H920 327 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF224Q9NZL3 707 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 CSPG4Q6UVK1 2322 aa13.58□□□□□ -0.24
COL16A1-212ENST00000482478 HEATR1Q9H583 2144 aaKnown RBP13.58□□□□□ -0.24
COL16A1-212ENST00000482478 TRAV27A0A087WT01 109 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 GPRIN2O60269 458 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 GMNNO75496 209 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SLC2A10O95528 541 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 PATE4P0C8F1 98 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF14P17017 642 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 GNGT1P63211 74 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 RUNX1T1Q06455 604 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 RAB39AQ14964 217 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 TMEM53Q6P2H8 277 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 CBLL1Q75N03 491 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SLC16A14Q7RTX9 510 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 PIWIL3Q7Z3Z3 882 aaKnown RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 IGFN1Q86VF2 1251 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 MEX3DQ86XN8 651 aaKnown RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 CDK20Q8IZL9 346 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 RBM15BQ8NDT2 890 aaKnown RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 MCHR2Q969V1 340 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 DENND2DQ9H6A0 471 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 MYOZ1Q9NP98 299 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 B3GNT2Q9NY97 397 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 ABCD2Q9UBJ2 740 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 FBXO9Q9UK97 447 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-212ENST00000482478 CMAHPQ9Y471 501 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 SNX13Q9Y5W8 968 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 V9GYQ6 96 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 CR1P17927 2039 aa13.57□□□□□ -0.24
COL16A1-212ENST00000482478 A0A1W2PPW3 197 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 EFCAB9A8MZ26 197 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 CD5LO43866 347 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 SNX3O60493 162 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 TRMUO75648 421 aaKnown RBP13.56□□□□□ -0.24
COL16A1-212ENST00000482478 F12P00748 615 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-212ENST00000482478 ACADSP16219 412 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF16P17020 682 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-212ENST00000482478 PRDX6P30041 224 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 GPR4P46093 362 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 HSF2Q03933 536 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 FMODQ06828 376 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 GGTLC2Q14390 218 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 MST1LQ2TV78 715 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 FGD3Q5JSP0 725 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 C8orf82Q6P1X6 216 aaPredicted RBP13.56□□□□□ -0.24
COL16A1-212ENST00000482478 SKA3Q8IX90 412 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 SLC30A7Q8NEW0 376 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 OR10H5Q8NGA6 315 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 OR13C2Q8NGS9 318 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 NSMAFQ92636 917 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 SYT3Q9BQG1 590 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 MYLK2Q9H1R3 596 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 OR51B6Q9H340 312 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 CDH20Q9HBT6 801 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 YAE1D1Q9NRH1 226 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 MAN2C1Q9NTJ4 1040 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 HIF3AQ9Y2N7 669 aa13.56□□□□□ -0.24
COL16A1-212ENST00000482478 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 M0R233 179 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 DRD4P21917 467 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 NR4A1P22736 598 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL16A1-212ENST00000482478 TMEM249Q2WGJ8 235 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 LRFN4Q6PJG9 635 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 DPPA2Q7Z7J5 298 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 LRRC18Q8N456 261 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 RNF148Q8N7C7 305 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms