RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZBTB9Q96C00 473 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RNF170Q96K19 258 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SLC30A2Q9BRI3 323 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 MMP28Q9H239 520 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ZDHHC4Q9NPG8 344 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RMND1Q9NWS8 449 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 MRPL39Q9NYK5 338 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 MAT2BQ9NZL9 334 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 IL36AQ9UHA7 158 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ZNHIT2Q9UHR6 403 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 LSM7Q9UK45 103 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 INSL5Q9Y5Q6 135 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 LOC105371267A0A1B0GV96 52 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FAM231BA6NCW3 169 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 INAFM1C9JVW0 142 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 HUS1O60921 280 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 CLDN9O95484 217 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ANGPTL1O95841 491 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 IFNA2P01563 188 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RPN2P04844 631 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 WNT2P09544 360 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TRIM49P0CI25 452 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TRIM49CP0CI26 452 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 MLNP12872 115 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 PSMA2P25787 234 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 GCAP28676 217 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 YWHABP31946 246 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 BNIP2Q12982 314 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 ATRAIDQ6UW56 229 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 KRTAP1-3Q8IUG1 177 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 CMTM1Q8IZ96 169 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 OR10V1Q8NGI7 309 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 FGF14Q92915 247 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 PSMG2Q969U7 264 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 BIRC7Q96CA5 298 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RTP4Q96DX8 246 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 TXNDC15Q96J42 360 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 NKX3-1Q99801 234 aaPredicted RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 APOL2Q9BQE5 337 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 COMMD4Q9H0A8 199 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 VCX3BQ9H321 246 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SMYD3Q9H7B4 428 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 SP140LQ9H930 580 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 WDR54Q9H977 334 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 OLFML3Q9NRN5 406 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 AGPAT4Q9NRZ5 378 aa2.78□□□□□ -1.96
SMC6-208ENST00000481708 RALYQ9UKM9 306 aaKnown RBP2.78□□□□□ -1.96
SMC6-208ENST00000481708 IGLV9-49A0A0B4J1Y8 123 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SMCO3A2RU48 225 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 RAB19A4D1S5 217 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 NPIPB8E9PQR5 432 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 H3BMQ9 156 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ATP5LO75964 103 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SCGNO76038 276 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PDE5AO76074 875 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ALDOBP05062 364 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CALM1P0DP23 149 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CALM2P0DP24 149 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CALM3P0DP25 149 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PCYT1AP49585 367 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CCL23P55773 120 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 BLOC1S1P78537 153 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 KCTD19Q17RG1 926 aaPredicted RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 LINC00303Q3SY05 128 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CARD16Q5EG05 197 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TYW3Q6IPR3 259 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZNF730Q6ZMV8 503 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TMEM17Q86X19 198 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PLD3Q8IV08 490 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SNX31Q8N9S9 440 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 ZNF114Q8NC26 417 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SLC37A3Q8NCC5 494 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 OR5B3Q8NH48 314 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CCDC127Q96BQ5 260 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 LURAP1Q96LR2 239 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TSNARE1Q96NA8 513 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CPXM1Q96SM3 734 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 TIMP4Q99727 224 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 MAPKAP1Q9BPZ7 522 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PLAC1Q9HBJ0 212 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 DYRK4Q9NR20 520 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SIRT7Q9NRC8 400 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 SLC17A4Q9Y2C5 497 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 EXOSC1Q9Y3B2 195 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 HS3ST3B1Q9Y662 390 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 OTOGQ6ZRI0 2925 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PCP4L1A6NKN8 68 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 RCBTB2O95199 551 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 BAG4O95429 457 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 CD74P04233 296 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PRKCGP05129 697 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 POLR2EP19388 210 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 AADACP22760 399 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CCR2P41597 374 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CSNK1DP48730 415 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 PSMD4P55036 377 aaKnown RBP2.77□□□□□ -1.97
SMC6-208ENST00000481708 KCNJ2P63252 427 aa2.77□□□□□ -1.97
SMC6-208ENST00000481708 CYLC2Q14093 348 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms