RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 DAZ2Q13117 558 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 HSP90AA5PQ58FG0 334 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 CCDC137Q6PK04 289 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 C12orf54Q6X4T0 127 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 RNF165Q6ZSG1 346 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 KIAA1328Q86T90 577 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 TPRA1Q86W33 373 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 ENTHD1Q8IYW4 607 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 DHRSXQ8N5I4 330 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 C20orf203Q8NBC4 194 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 ZNF740Q8NDX6 193 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 OR10A7Q8NGE5 316 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 NEIL3Q8TAT5 605 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 PAQR8Q8TEZ7 354 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 ZMYND19Q96E35 227 aaPredicted RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 C12orf66Q96MD2 445 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 COL21A1Q96P44 957 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 POLR2J2Q9GZM3 115 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 POLR2J3Q9H1A7 115 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 NXF5Q9H1B4 397 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 DPH5Q9H2P9 285 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 SMYD3Q9H7B4 428 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
COPA-204ENST00000481522 NUDT15Q9NV35 164 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 GNG12Q9UBI6 72 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 NEU3Q9UQ49 428 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 UGT2A1Q9Y4X1 527 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 SF3B1O75533 1304 aaKnown RBP eCLIP2.36□□□□□ -2.03
COPA-204ENST00000481522 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
COPA-204ENST00000481522 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 A0A1B0GUA9 196 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 PSMB11A5LHX3 300 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 PIN1P1O15428 100 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 LRATO95237 230 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 ASNSP08243 561 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 PSG2P11465 335 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 NCF1P14598 390 aaPredicted RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 HNRNPA3P51991 378 aaKnown RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 MECOMQ03112 1051 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 ARL6IP1Q15041 203 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 NSDHLQ15738 373 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 TPD52L1Q16890 204 aaPredicted RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 HES3Q5TGS1 186 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 KHDRBS2Q5VWX1 349 aaKnown RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 ATL3Q6DD88 541 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 BLOC1S2Q6QNY1 142 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 ACOT1Q86TX2 421 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 SVOPLQ8N434 492 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 CLDN19Q8N6F1 224 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 Q8N9L7 120 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 STXBP6Q8NFX7 210 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 OR10T2Q8NGX3 314 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 FBXO30Q8TB52 745 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 MRPS31Q92665 395 aaKnown RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 RPL3LQ92901 407 aaKnown RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 C4orf36Q96KX1 117 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 CCNL2Q96S94 520 aaPredicted RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 MBOAT4Q96T53 435 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 NRTNQ99748 197 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 GAL3ST1Q99999 423 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 KLHDC3Q9BQ90 382 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 ASCL3Q9NQ33 180 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 ZNF331Q9NQX6 463 aaPredicted RBP2.35□□□□□ -2.03
COPA-204ENST00000481522 MMP26Q9NRE1 261 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 TREM2Q9NZC2 230 aa2.35□□□□□ -2.03
COPA-204ENST00000481522 VWA8A3KMH1 1905 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 RGSL1A5PLK6 1076 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 A8MUA0 341 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 PPIAL4DF5H284 164 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 K7EM74 188 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 ZSCAN12O43309 604 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 NPIPB7O75200 414 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 ZNF780AO75290 641 aaPredicted RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 KLF8O95600 359 aaPredicted RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 IGHV4-34P06331 123 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 NT5EP21589 574 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 COX7A1P24310 79 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 PRDX3P30048 256 aaKnown RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 FGF9P31371 208 aaPredicted RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 YWHABP31946 246 aaKnown RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 HPCAL1P37235 193 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 MDH1P40925 334 aaKnown RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 LEPP41159 167 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 BPIFB3P59826 476 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 PJVKQ0ZLH3 352 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 TRIM16LQ309B1 348 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 C1orf146Q5VVC0 180 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 IGFL3Q6UXB1 125 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 ACBD4Q8NC06 268 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 OR5L2Q8NGL0 311 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 SPRYD4Q8WW59 207 aaPredicted RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 RAPGEF5Q92565 580 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 UCN3Q969E3 161 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 PGLYRP4Q96LB8 373 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 RIT2Q99578 217 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 SLC35A5Q9BS91 424 aa2.34□□□□□ -2.03
COPA-204ENST00000481522 THUMPD2Q9BTF0 503 aaKnown RBP2.34□□□□□ -2.03
COPA-204ENST00000481522 SLC25A39Q9BZJ4 359 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms