RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GPR119Q8TDV5 335 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 NSMAFQ92636 917 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 NXPE2Q96DL1 559 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 RBP7Q96R05 134 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 FOXQ1Q9C009 403 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 NOX3Q9HBY0 568 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MGAT4CQ9UBM8 478 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MTCH2Q9Y6C9 303 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 RHPN2P1A8MT19 583 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 GPRIN2O60269 458 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 KRT33AO76009 404 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 PNPP00491 289 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 HLA-DOBP13765 273 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 ALOX5APP20292 161 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 CXCR1P25024 350 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 KIR3DL2P43630 455 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SQSTM1Q13501 440 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SERTAD2Q14140 314 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 GRK1Q15835 563 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 Q499Y3 187 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SLC22A10Q63ZE4 541 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SIGIRRQ6IA17 410 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 FAM198BQ6UWH4 519 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 ZNF782Q6ZMW2 699 aaPredicted RBP9.77□□□□□ -0.85
VPS52-217ENST00000478934 SYT13Q7L8C5 426 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 FAM220AQ7Z4H9 259 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 GKN2Q86XP6 184 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 ZNF676Q8N7Q3 588 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 FCAMRQ8WWV6 532 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 TMEM106AQ96A25 262 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MSANTD3Q96H12 275 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 LRFN5Q96NI6 719 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 OR1F2PQ96R84 312 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 SLC19A3Q9BZV2 496 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 ADAM19Q9H013 955 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 B3GNT2Q9NY97 397 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 GLTPQ9NZD2 209 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 KLHL9Q9P2J3 617 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 CTSFQ9UBX1 484 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 NUP210LQ5VU65 1888 aa9.77□□□□□ -0.85
VPS52-217ENST00000478934 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 H0YIG0 161 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ZNF354AO60765 605 aaPredicted RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 KDM4BO94953 1096 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 HIST1H2ABP04908 130 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 POU3F2P20265 443 aaPredicted RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 IL12BP29460 328 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 SLC25A1P53007 311 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 PUDPQ08623 228 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 EBPQ15125 230 aaKnown RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 C2orf68Q2NKX9 166 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 TCTE1Q5JU00 501 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 SFRP5Q5T4F7 317 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 HIST3H2AQ7L7L0 130 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 COMMD7Q86VX2 200 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 DND1Q8IYX4 353 aaKnown RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 SLC43A2Q8N370 569 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 OR8S1Q8NH09 359 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 DVL3Q92997 716 aaPredicted RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 HIST1H2ACQ93077 130 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 CCDC74AQ96AQ1 378 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 S100A16Q96FQ6 103 aaKnown RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 SLC46A1Q96NT5 459 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 EVA1AQ9H8M9 152 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 TAS2R10Q9NYW0 307 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 IGKV3D-11A0A0A0MRZ8 115 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 FITM1A5D6W6 292 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 GSTZ1O43708 216 aaPredicted RBP9.76□□□□□ -0.85
VPS52-217ENST00000478934 BGLAPP02818 100 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 CD27P26842 260 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 LCN1P31025 176 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 TAS2R20P59543 309 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 IL10RAQ13651 578 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 UBXN2BQ14CS0 331 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ACKR1Q16570 336 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 WDR38Q5JTN6 314 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ASPHD2Q6ICH7 369 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ZNF440Q8IYI8 595 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 OR51D1Q8NGF3 324 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 DUSP19Q8WTR2 217 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 PTDSS2Q9BVG9 487 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
VPS52-217ENST00000478934 RPS10-NUDT3A0A1W2PQS6 291 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 FRG2CA6NGY1 282 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 LILRA5A6NI73 299 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ANXA2P2A6NMY6 339 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 SHISA8B8ZZ34 492 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 GABARAPH6UMI1 98 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 SLC16A7O60669 478 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ITGA10O75578 1167 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 ANXA2P07355 339 aaKnown RBP9.75□□□□□ -0.85
VPS52-217ENST00000478934 ABCD3P28288 659 aa9.75□□□□□ -0.85
VPS52-217ENST00000478934 CSF2RBP32927 897 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms