RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 USF1P22415 310 aaPredicted RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 GDF1P27539 372 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 PRDX6P30041 224 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 NAPAP54920 295 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 HERVK_113P63132 956 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 ERVK-8P63133 956 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 CXCL6P80162 114 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 ALX1Q15699 326 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 GSG1Q2KHT4 349 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 PARP6Q2NL67 630 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 RNF212Q495C1 297 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 LEG1Q6P5S2 330 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 FAM159AQ6UWV7 190 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 C2orf66Q6UXQ4 117 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 P4HA3Q7Z4N8 544 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 SH2D6Q7Z4S9 175 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 DENND6BQ8NEG7 585 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 FNDC8Q8TC99 324 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 TFB1MQ8WVM0 346 aaKnown RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 CCDC47Q96A33 483 aaKnown RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 OR5M11Q96RB7 305 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 MYCBPQ99417 103 aaPredicted RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 LXNQ9BS40 222 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 SPXQ9BT56 116 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 SPZ1Q9BXG8 430 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 TBC1D10AQ9BXI6 508 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 ERVK-6Q9BXR3 956 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF490Q9ULM2 529 aaPredicted RBP3.66□□□□□ -1.82
CCDC171-207ENST00000478913 PYCARDQ9ULZ3 195 aa3.66□□□□□ -1.82
CCDC171-207ENST00000478913 TTC26A0AVF1 554 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 SMCO2A6NFE2 343 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 DEFB108AA8MXU0 73 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 G3V3Y1 287 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CLDN5O00501 218 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 HUS1O60921 280 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 PLEKHA8P1O95397 391 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 RALAP11233 206 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 FASP25445 335 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CASQ1P31415 396 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 MDH2P40926 338 aaKnown RBP3.65□□□□□ -1.83
CCDC171-207ENST00000478913 MTTPP55157 894 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 SRYQ05066 204 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 SNX1Q13596 522 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 PDK1Q15118 436 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 IRF4Q15306 451 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 TAF9Q16594 264 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 BEND6Q5SZJ8 279 aaPredicted RBP3.65□□□□□ -1.83
CCDC171-207ENST00000478913 RAB12Q6IQ22 244 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 BLOC1S2Q6QNY1 142 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CERS6Q6ZMG9 384 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 FAM92BQ6ZTR7 304 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 LRRC8AQ8IWT6 810 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 KIR3DL3Q8N743 410 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC110Q8TBZ0 833 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 ADAMTS16Q8TE57 1224 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 TMEM186Q96B77 213 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 DNAJA3Q96EY1 480 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CITED1Q99966 193 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 CARD6Q9BX69 1037 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 TMEM231Q9H6L2 316 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 FAM114A2Q9NRY5 505 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
CCDC171-207ENST00000478913 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC171-207ENST00000478913 MBD2Q9UBB5 411 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 MTRF1LQ9UGC7 380 aaKnown RBP3.65□□□□□ -1.83
CCDC171-207ENST00000478913 TTC41PQ6P2S7 1318 aa3.65□□□□□ -1.83
CCDC171-207ENST00000478913 TRBV7-9A0A0J9YWB2 115 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 WI2-2373I1.2A0A1W2PRP0 233 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 SLC5A10A0PJK1 596 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 BICDL2A1A5D9 508 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 KLRC4-KLRK1H3BQV0 150 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 POLR3GO15318 223 aaPredicted RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 SSX5O60225 188 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 DUSP14O95147 198 aaKnown RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 MT-ATP6P00846 226 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 GIG44P09565 113 aaPredicted RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 SLC35G4P0C7Q5 338 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 ZCCHC18P0CG32 403 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 CT45A10P0DMU9 189 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 POU3F4P49335 361 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 CAMK4Q16566 473 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 ZSCAN26Q16670 478 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 ZSWIM7Q19AV6 140 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 RSBN1Q5VWQ0 802 aaPredicted RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 PLBD1Q6P4A8 553 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 TMEM26Q6ZUK4 368 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 RUFY3Q7L099 469 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 NT5DC3Q86UY8 548 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 C11orf53Q8IXP5 236 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF525Q8N782 197 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 LRRC52Q8N7C0 313 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 CEP112Q8N8E3 955 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 OR56A4Q8NGH8 313 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 C11orf24Q96F05 449 aaPredicted RBP3.64□□□□□ -1.83
CCDC171-207ENST00000478913 PAXXQ9BUH6 204 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 GSDMCQ9BYG8 508 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 DEFB126Q9BYW3 111 aa3.64□□□□□ -1.83
CCDC171-207ENST00000478913 CDC42EP4Q9H3Q1 356 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms