RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FPR3P25089 353 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 NR1H2P55055 460 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 FMODQ06828 376 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ANKDD1AQ495B1 522 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ARMC4Q5T2S8 1044 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ADAM5Q6NVV9 412 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ANKRD16Q6P6B7 361 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SMARCD3Q6STE5 483 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SEZ6L2Q6UXD5 910 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 THSD4Q6ZMP0 1018 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ASRGL1Q7L266 308 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 C17orf78Q8N4C9 275 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 LRRC75AQ8NAA5 344 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 AQP11Q8NBQ7 271 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 NSMAFQ92636 917 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 HDAC2Q92769 488 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 TMEM54Q969K7 222 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 RASD2Q96D21 266 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF570Q96NI8 536 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 MUS81Q96NY9 551 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 FOXB1Q99853 325 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 NELFAQ9H3P2 528 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 LIME1Q9H400 295 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ESRP2Q9H6T0 727 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 YY1AP1Q9H869 796 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 GRHPRQ9UBQ7 328 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF346Q9UL40 294 aaKnown RBP6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SIGLEC7Q9Y286 467 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 AMDHD2Q9Y303 409 aa6.04□□□□□ -1.44
BRCA1-215ENST00000478531 SOCS2O14508 198 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 XKRYO14609 159 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 ABCD4O14678 606 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 ARHGEF9O43307 516 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 TIPRLO75663 272 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 GOSR1O95249 250 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 PPP1R3DO95685 299 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 IGHMP01871 453 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 CD14P08571 375 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 CD79AP11912 226 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 FXYD6P3P58550 94 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 SPOCK1Q08629 439 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 NPRL3Q12980 569 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 KRR1Q13601 381 aaKnown RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 CLEC12AQ5QGZ9 265 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 LRFN4Q6PJG9 635 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 KLHL17Q6TDP4 642 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF704Q6ZNC4 412 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 KBTBD8Q8NFY9 601 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 OR10G2Q8NGC3 310 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 OR4C15Q8NGM1 316 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF519Q8TB69 540 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 GNPDA2Q8TDQ7 276 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 BCL2L2Q92843 193 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 MCHR2Q969V1 340 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 UTP4Q969X6 686 aaKnown RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 SLCO4A1Q96BD0 722 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 SAMD8Q96LT4 415 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 Q96M85 177 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 IFT27Q9BW83 186 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 OR52D1Q9H346 318 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 EGLN3Q9H6Z9 239 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 STX18Q9P2W9 335 aaKnown RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 PLEKHA6Q9Y2H5 1048 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 RNF115Q9Y4L5 304 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 TEP1Q99973 2627 aaKnown RBP6.03□□□□□ -1.44
BRCA1-215ENST00000478531 RTTNQ86VV8 2226 aa6.03□□□□□ -1.44
BRCA1-215ENST00000478531 IGKV1D-43A0A0B4J1Z2 117 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF503-AS2A6NEH8 195 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 DPRXA6NFQ7 191 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 A6NIZ1 184 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NPIPB13A6NJU9 1138 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NPIPB4C9JG80 1138 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 DHHO43323 396 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PTP4A3O75365 173 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SOX14O95416 240 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 GASTP01350 101 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HLA-HP01893 362 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 LOXP28300 417 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NOS3P29474 1203 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CDAP32320 146 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 GSSP48637 474 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF84P51523 738 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 HMGA2P52926 109 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RAP1BP61224 184 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 RAP1AP62834 184 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 PIGFQ07326 219 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 TSPAN31Q12999 210 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 CCNIQ14094 377 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MICAQ29983 383 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 MESTQ5EB52 335 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 NCMAPQ5T1S8 102 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 FAM205BPQ63HN1 556 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 C1orf94Q6P1W5 598 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 SLC22A25Q6T423 547 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 TMEM108Q6UXF1 575 aa6.02□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF620Q6ZNG0 422 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms