RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 SH3PXD2BA1X283 911 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 DHHO43323 396 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 GADD45GO95257 159 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 IGKV3-15P01624 115 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 IGHMP01871 453 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 HLA-HP01893 362 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 QDPRP09417 244 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 CECR9P0C854 216 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 ITGA2P17301 1181 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 RRM2P31350 389 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 CAPZA2P47755 286 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 FXYD6P3P58550 94 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 RPL27P61353 136 aaKnown RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 FMODQ06828 376 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 HIST3H3Q16695 136 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 ZBED5Q49AG3 693 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 RRM2BQ7LG56 351 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 MDP1Q86V88 176 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 DHFR2Q86XF0 187 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 CDK20Q8IZL9 346 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 FGFBP3Q8TAT2 258 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF519Q8TB69 540 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 TMEM171Q8WVE6 324 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 KATNB1Q9BVA0 655 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF346Q9UL40 294 aaKnown RBP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 MOKQ9UQ07 419 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 LAMP3Q9UQV4 416 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 SIGLEC7Q9Y286 467 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
COL1A2-207ENST00000478215 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
COL1A2-207ENST00000478215 MALRD1Q5VYJ5 2156 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ACOT8O14734 319 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 SMPD2O60906 423 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 PTP4A3O75365 173 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 SLC2A10O95528 541 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 CD8AP01732 235 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 PATE4P0C8F1 98 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 CD79AP11912 226 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 CBR1P16152 277 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 CALCRP30988 508 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 MAGEA2P43356 314 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ERVK-25P63136 954 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ADAM8P78325 824 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 PIGFQ07326 219 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 NPRL3Q12980 569 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 PIWIL3Q7Z3Z3 882 aaKnown RBP11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ZER1Q7Z7L7 766 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 WFDC11Q8NEX6 87 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ASB9Q96DX5 294 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 PERPQ96FX8 193 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ZNF75AQ96N20 296 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ADAM18Q9Y3Q7 739 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ABCA2Q9BZC7 2435 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
COL1A2-207ENST00000478215 CENPBD1B2RD01 187 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 H7C1C5 153 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 OVOL3O00110 214 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 GYG2O15488 501 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 CD14P08571 375 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 ACVR1BP36896 505 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 PTH2RP49190 550 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 SMIM11AP58511 58 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 LCN6P62502 163 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 NAAAQ02083 359 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 CD47Q08722 323 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 PPP1R8Q12972 351 aaKnown RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 TAF11Q15544 211 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 ANKDD1AQ495B1 522 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 C10orf128Q5T292 105 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 PGM2L1Q6PCE3 622 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 HDDC2Q7Z4H3 204 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 SLC22A24Q8N4F4 322 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 FAM169BQ8N8A8 192 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 GTPBP3Q969Y2 492 aaKnown RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 RSRC1Q96IZ7 334 aaKnown RBP11.3□□□□□ -0.6
COL1A2-207ENST00000478215 Q96M85 177 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 SH3GL3Q99963 347 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 DHRS9Q9BPW9 319 aa11.3□□□□□ -0.6
COL1A2-207ENST00000478215 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms