RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NR1H2P55055 460 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 SH3BGRP55822 239 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 RPL27P61353 136 aaKnown RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 BSPH1Q075Z2 132 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 SPOCK1Q08629 439 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 CD47Q08722 323 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 CCNIQ14094 377 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ANKDD1AQ495B1 522 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF770Q6IQ21 691 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ADAM5Q6NVV9 412 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 C1orf94Q6P1W5 598 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 LRFN4Q6PJG9 635 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 SMARCD3Q6STE5 483 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF813Q6ZN06 617 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF704Q6ZNC4 412 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 HDDC2Q7Z4H3 204 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 AQP11Q8NBQ7 271 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF519Q8TB69 540 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 GNPDA2Q8TDQ7 276 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 NSMAFQ92636 917 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 MCHR2Q969V1 340 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 GTPBP3Q969Y2 492 aaKnown RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 RASD2Q96D21 266 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 Q96M85 177 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF570Q96NI8 536 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 FOXB1Q99853 325 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 MRPL13Q9BYD1 178 aaKnown RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 NDEL1Q9GZM8 345 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 MMADHCQ9H3L0 296 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-222ENST00000478095 UBTD1Q9HAC8 227 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 NGBQ9NPG2 151 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 GRHPRQ9UBQ7 328 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 IER3IP1Q9Y5U9 82 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 MPDZO75970 2070 aa8.98□□□□□ -0.97
HDAC6-222ENST00000478095 IGKV1D-43A0A0B4J1Z2 117 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NPIPB13A6NJU9 1138 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NPIPB4C9JG80 1138 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 ABCD4O14678 606 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 ARHGEF9O43307 516 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 E2F6O75461 281 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 TIPRLO75663 272 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 PPP1R3DO95685 299 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 WNT11O96014 354 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 GASTP01350 101 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 HLA-HP01893 362 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 CD3EP07766 207 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 CD14P08571 375 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 GSSP48637 474 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 TSPAN31Q12999 210 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 TAF11Q15544 211 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 HIST3H3Q16695 136 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 MICAQ29983 383 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 MESTQ5EB52 335 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NCMAPQ5T1S8 102 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 ZNF620Q6ZNG0 422 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 FAM122BQ7Z309 247 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 TMEM179BQ7Z7N9 219 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 CDH24Q86UP0 819 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 ARIH2OSQ8N7S6 290 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 KBTBD8Q8NFY9 601 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 OR10G2Q8NGC3 310 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NEUROG1Q92886 237 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 SAMD8Q96LT4 415 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 OR52D1Q9H346 318 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 ESRP2Q9H6T0 727 aaKnown RBP8.97□□□□□ -0.97
HDAC6-222ENST00000478095 EGLN3Q9H6Z9 239 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 PLEKHF2Q9H8W4 249 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 SEC61A2Q9H9S3 476 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 NRIP3Q9NQ35 241 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 CCM2LQ9NUG4 571 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-222ENST00000478095 PLEKHA6Q9Y2H5 1048 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 RNF115Q9Y4L5 304 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
HDAC6-222ENST00000478095 CENPEQ02224 2701 aa8.96□□□□□ -0.97
HDAC6-222ENST00000478095 FREM1Q5H8C1 2179 aa8.96□□□□□ -0.97
HDAC6-222ENST00000478095 ABCA12Q86UK0 2595 aa8.96□□□□□ -0.97
HDAC6-222ENST00000478095 ARPC4-TTLL3A0A0A6YYG9 625 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 A6NIZ1 184 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 SOCS2O14508 198 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 XKRYO14609 159 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 IMPA2O14732 288 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 SOX14O95416 240 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 IGFBP1P08833 259 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 PATE4P0C8F1 98 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 CD79AP11912 226 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 CD40P25942 277 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 SDHAP31040 664 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 SLC6A6P31641 620 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 CDAP32320 146 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 RAP1BP61224 184 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 RAP1AP62834 184 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 PIGFQ07326 219 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 DBPQ10586 325 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 NPRL3Q12980 569 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 KRR1Q13601 381 aaKnown RBP8.96□□□□□ -0.98
HDAC6-222ENST00000478095 RFX4Q33E94 735 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 CLEC12AQ5QGZ9 265 aa8.96□□□□□ -0.98
HDAC6-222ENST00000478095 FAM205BPQ63HN1 556 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms