RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	hCG_2039718	K7EN88	272 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TNFRSF11B	O00300	401 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	HNRNPR	O43390	633 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	OR10H3	O60404	316 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TPST2	O60704	377 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	BCAS1	O75363	584 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MRPL33	O75394	65 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RCBTB2	O95199	551 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	C1QC	P02747	245 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	OPN1LW	P04000	364 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	IL6R	P08887	468 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SAG	P10523	405 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	PRG2	P13727	222 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	PLA2G2A	P14555	144 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF43	P17038	809 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	AGA	P20933	346 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ATP6V1B2	P21281	511 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	FAS	P25445	335 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TIMP3	P35625	211 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RPL4	P36578	427 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RPS5	P46782	204 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	YAP1	P46937	504 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF136	P52737	540 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	CDH12	P55289	794 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	DLX5	P56178	289 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	CLDN18	P56856	261 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	CLDN20	P56880	219 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SIRPA	P78324	504 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RASGEF1B	Q0VAM2	473 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MYBPH	Q13203	477 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	PIN1	Q13526	163 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SLC25A35	Q3KQZ1	300 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ANKDD1A	Q495B1	522 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ACSF3	Q4G176	576 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	GLIPR1L2	Q4G1C9	344 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	OTUD3	Q5T2D3	398 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZFP1	Q6P2D0	407 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	PAQR6	Q6TCH4	344 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	C6orf89	Q6UWU4	347 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	C3P1	Q6ZMU1	363 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF771	Q7L3S4	317 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	FCRLA	Q7L513	359 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	NANOGNB	Q7Z5D8	188 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	GALNT5	Q7Z7M9	940 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	GPAT4	Q86UL3	456 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	UEVLD	Q8IX04	471 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	OFCC1	Q8IZS5	231 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	UBE2J2	Q8N2K1	259 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	C10orf111	Q8N326	155 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	PRR18	Q8N4B5	295 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SCAI	Q8N9R8	606 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	GPR32P1	Q8NGA4	272 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	OR52L1	Q8NGH7	329 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SSC4D	Q8WTU2	575 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TMEM239	Q8WW34	195 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ACOT11	Q8WXI4	607 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	INTS12	Q96CB8	462 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	NTNG2	Q96CW9	530 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	GMPPA	Q96IJ6	420 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF845	Q96IR2	970 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF300	Q96RE9	604 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TUBA1C	Q9BQE3	449 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	TTYH2	Q9BSA4	534 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SF3B5	Q9BWJ5	86 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	SFXN3	Q9BWM7	321 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	CADM1	Q9BY67	442 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	FKRP	Q9H9S5	495 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MCCC2	Q9HCC0	563 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	IL1RAP	Q9NPH3	570 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	KCNJ16	Q9NPI9	418 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	B3GAT2	Q9NPZ5	323 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	NRIP3	Q9NQ35	241 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	KIF17	Q9P2E2	1029 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	UPB1	Q9UBR1	384 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ZNF629	Q9UEG4	869 aa	Predicted RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ENOPH1	Q9UHY7	261 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RALY	Q9UKM9	306 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	USP22	Q9UPT9	525 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	POMP	Q9Y244	141 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RASD1	Q9Y272	281 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	B3GALT5	Q9Y2C3	310 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	NOSIP	Q9Y314	301 aa	Known RBP	4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ORC6	Q9Y5N6	252 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	FAM208B	Q5VWN6	2430 aa		4	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	COL6A6	A6NMZ7	2263 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289		A0A1W2PRQ8	180 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MBD3L4	A6NDZ8	208 aa	Predicted RBP	3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MBD3L3	A6NE82	208 aa	Predicted RBP	3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	ERICH4	A6NGS2	130 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	LIPT2	A6NK58	231 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	C17orf51	A8MQB3	221 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	EFCAB9	A8MZ26	197 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	EEF1E1-BLOC1S5	C9J1V9	151 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	BLOC1S5-TXNDC5	H3BN57	136 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	KPNA4	O00629	521 aa	Predicted RBP	3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	XKRY	O14609	159 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	CASK	O14936	926 aa		3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	EEF1E1	O43324	174 aa	Known RBP	3.99	□□□□□ -1.77
NSMCE4A-208	ENST00000477289	RNF13	O43567	381 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms