RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 VSX1Q9NZR4 365 aaPredicted RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 STEAP1Q9UHE8 339 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 GPR34Q9UPC5 381 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 NPFFR2Q9Y5X5 522 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 SHISA3A0PJX4 238 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 RNF144AP50876 292 aaPredicted RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 PCBD1P61457 104 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 VAMP3Q15836 100 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 LPCAT3Q6P1A2 487 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 OR6V1Q8N148 313 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 HUS1BQ8NHY5 278 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 RNF141Q8WVD5 230 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 APH1AQ96BI3 265 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 SCLYQ96I15 445 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 HHIPL1Q96JK4 782 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 TINAGL1Q9GZM7 467 aaPredicted RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 MCM3APO60318 1980 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 LTBP4Q8N2S1 1624 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 CBY3A6NI87 242 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 FAM171A2A8MVW0 826 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ACRP10323 421 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 PPP3CBP16298 524 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 LAP3P28838 519 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 SRP9P49458 86 aaKnown RBP10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ZXDBP98169 803 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 VEZF1Q14119 521 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ADAM5Q6NVV9 412 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 DUSP19Q8WTR2 217 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 HRASLSQ9HDD0 168 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 ISYNA1Q9NPH2 558 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 RASD1Q9Y272 281 aa10.65□□□□□ -0.7
U2AF1-209ENST00000475639 EP300Q09472 2414 aaPredicted RBP10.65□□□□□ -0.71
U2AF1-209ENST00000475639 MPTX1A8MV57 137 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 LEFTY1O75610 366 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZIC2O95409 532 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ELK1P19419 428 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 CXCL2P19875 107 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TBPP20226 339 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 EPHA4P54764 986 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SHC2P98077 582 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TESK1Q15569 626 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR4C11Q6IEV9 310 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ALKAL2Q6UX46 152 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 GRASPQ7Z6J2 395 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR10K1Q8NGX5 313 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZNRF4Q8WWF5 429 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 CORO2AQ92828 525 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR5B2Q96R09 309 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 DDOQ99489 341 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ENKD1Q9H0I2 346 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 METTL17Q9H7H0 456 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF230Q9UIE0 474 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ING1Q9UK53 422 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OSGIN2Q9Y236 505 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SPAG17Q6Q759 2223 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 hCG_1809904A0A1W2PP81 198 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 A0A1W2PPE2 198 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 A0A1W2PQU0 124 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 A0A1W2PR64 198 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 A0A1W2PRV1 198 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 PQLC2LA1A4F0 135 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 MCRIP1C9JLW8 97 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TCRBP04435 133 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 RAB40BQ12829 278 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF322Q6U7Q0 402 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 FJX1Q86VR8 437 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 MRPS24Q96EL2 167 aaKnown RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ACPTQ9BZG2 426 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 DPH1Q9BZG8 443 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 C1orf198Q9H425 327 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 EVA1AQ9H8M9 152 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 NMNAT1Q9HAN9 279 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 KCNK7Q9Y2U2 307 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 GPR39O43194 453 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 GASTP01350 101 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ADRB1P08588 477 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 H2AFB1P0C5Y9 115 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 IRS1P35568 1242 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SORDQ00796 357 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 PIN1Q13526 163 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SLC9A3R2Q15599 337 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 CTSL3PQ5NE16 218 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 FIGLAQ6QHK4 219 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 IL34Q6ZMJ4 242 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SERINC5Q86VE9 423 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms