RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 USP36Q9P275 1121 aaKnown RBP11.84□□□□□ -0.51
CCNL1-216ENST00000475298 LRP4O75096 1905 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 GABARAPH6UMI1 98 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 OR2T1O43869 369 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 GPR75O95800 540 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 CLUP10909 449 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 DCTDP32321 178 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 LUMP51884 338 aaPredicted RBP11.84□□□□□ -0.51
CCNL1-216ENST00000475298 SLC16A1P53985 500 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 PNLIPRP2P54317 469 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCNL1-216ENST00000475298 C1orf61Q13536 156 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 JMJD6Q6NYC1 403 aaPredicted RBP11.84□□□□□ -0.51
CCNL1-216ENST00000475298 CA13Q8N1Q1 262 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 OR51A7Q8NH64 312 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 SLC37A2Q8TED4 501 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 TMEM41AQ96HV5 264 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 PGLYRP3Q96LB9 341 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 HS6ST2Q96MM7 605 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 CD180Q99467 661 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
CCNL1-216ENST00000475298 TWSG1Q9GZX9 223 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 FBRSQ9HAH7 460 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 LYRM4Q9HD34 91 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 FAM60AQ9NP50 221 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 MED17Q9NVC6 651 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 FBXL4Q9UKA2 621 aa11.84□□□□□ -0.51
CCNL1-216ENST00000475298 A0A1B0GTQ1 180 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 A0A1B0GV90 55 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 C2orf74A8MZ97 194 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TXNL1O43396 289 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 CLN5O75503 358 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 KHDRBS3O75525 346 aaKnown RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ABOP16442 354 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF10P21506 573 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ACSM3Q53FZ2 586 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 EXOSC6Q5RKV6 272 aaKnown RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 CYB561A3Q8NBI2 242 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 OR4N2Q8NGD1 307 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 OR9A4Q8NGU2 314 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 BRIX1Q8TDN6 353 aaKnown RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 RSC1A1Q92681 617 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 BPIFA2Q96DR5 249 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 EGLN1Q9GZT9 426 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 OR51V1Q9H2C8 321 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 MEPEQ9NQ76 525 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 DMRT1Q9Y5R6 373 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 A0A1W2PPK0 400 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 HRKO00198 91 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TNFRSF10CO14798 259 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF749O43361 778 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 FMO6PO60774 539 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 KRT33AO76009 404 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 GYPBP06028 91 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 GABRG2P18507 467 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ADH7P40394 386 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 EMDP50402 254 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 AP3S2P59780 193 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 C3orf33Q6P1S2 294 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ZCCHC12Q6PEW1 402 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TSSK4Q6SA08 328 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 MUC20Q8N307 709 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ACBD7Q8N6N7 88 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TEX19Q8NA77 164 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 DNAAF1Q8NEP3 725 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 OR52L1Q8NGH7 329 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 KISS1RQ969F8 398 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 MAP3K3Q99759 626 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 DUSP22Q9NRW4 184 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ASF1BQ9NVP2 202 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 KLHL9Q9P2J3 617 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 METTL1Q9UBP6 276 aaKnown RBP11.83□□□□□ -0.52
CCNL1-216ENST00000475298 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 SLCO1B1Q9Y6L6 691 aa11.83□□□□□ -0.52
CCNL1-216ENST00000475298 LY86O95711 162 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 PTHLHP12272 177 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 IL9P15248 144 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 BMP7P18075 431 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 CD53P19397 219 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 AKT2P31751 481 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ACVR1BP36896 505 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 PGDP52209 483 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 FAM199XQ6PEV8 388 aaPredicted RBP11.82□□□□□ -0.52
CCNL1-216ENST00000475298 RPTNQ6XPR3 784 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 MEPCEQ7L2J0 689 aaKnown RBP11.82□□□□□ -0.52
CCNL1-216ENST00000475298 OR10H4Q8NGA5 316 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 PFDN5Q99471 154 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 MNTQ99583 582 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms