RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 GDF2Q9UK05 429 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-223ENST00000475146 ACANP16112 2415 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 CENPBD1B2RD01 187 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 NDUFS7O75251 213 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 ENTPD5O75356 428 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 DIRAS1O95057 198 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 RAB36O95755 333 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 IGHV4-39P01824 125 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 PTDSS1P48651 473 aaKnown RBP20.86■□□□□ 0.93
CPNE1-223ENST00000475146 ZNF84P51523 738 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 VLDLRP98155 873 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 ETFDHQ16134 617 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 ARMC4Q5T2S8 1044 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 PIWIL3Q7Z3Z3 882 aaKnown RBP20.86■□□□□ 0.93
CPNE1-223ENST00000475146 OR4F15Q8NGB8 312 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 PYURFQ96I23 114 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 NSL1Q96IY1 281 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 MRPL13Q9BYD1 178 aaKnown RBP20.86■□□□□ 0.93
CPNE1-223ENST00000475146 GSX1Q9H4S2 264 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-223ENST00000475146 BARX1Q9HBU1 254 aaPredicted RBP20.86■□□□□ 0.93
CPNE1-223ENST00000475146 CA10Q9NS85 328 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 B3GNT2Q9NY97 397 aa20.86■□□□□ 0.93
CPNE1-223ENST00000475146 IGHV2OR16-5A0A0B4J2B6 119 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 A0A1W2PRQ8 180 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 NPIPB13A6NJU9 1138 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 B2RBV5 119 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 NPIPB4C9JG80 1138 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SMAD7O15105 426 aaKnown RBP20.85■□□□□ 0.93
CPNE1-223ENST00000475146 UBL3O95164 117 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 FARS2O95363 451 aaKnown RBP20.85■□□□□ 0.93
CPNE1-223ENST00000475146 OR8G3PP0DMU2 310 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 ITGA2P17301 1181 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 GIPRP48546 466 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SLC9A3P48764 834 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 CTXN1P60606 82 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 CHRNB3Q05901 458 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 CD47Q08722 323 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 DGCR6Q14129 220 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 CLEC12BQ2HXU8 276 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 PODNL1Q6PEZ8 512 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SKA3Q8IX90 412 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 CIARTQ8N365 385 aaPredicted RBP20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SLC22A24Q8N4F4 322 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SLC7A13Q8TCU3 470 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 HTRA1Q92743 480 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 HDAC2Q92769 488 aaKnown RBP20.85■□□□□ 0.93
CPNE1-223ENST00000475146 FBXO17Q96EF6 278 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 COX4I2Q96KJ9 171 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 C7orf34Q96L11 122 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 TNFRSF13CQ96RJ3 184 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 SEPHS2Q99611 448 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 ZNF224Q9NZL3 707 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 TMEM5Q9Y2B1 443 aa20.85■□□□□ 0.93
CPNE1-223ENST00000475146 FLNAP21333 2647 aaKnown RBP20.85■□□□□ 0.93
CPNE1-223ENST00000475146 BMP4P12644 408 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 ACVR1BP36896 505 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 RAB1AP62820 205 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 TAF11Q15544 211 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 HIST3H3Q16695 136 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 ANKDD1AQ495B1 522 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 SPATS1Q496A3 300 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 BIVMQ86UB2 503 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 LRRC75AQ8NAA5 344 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 IL17RDQ8NFM7 739 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 OR4K5Q8NGD3 323 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 MCUR1Q96AQ8 359 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 MS4A3Q96HJ5 214 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 FAM46AQ96IP4 442 aaKnown RBP20.84■□□□□ 0.93
CPNE1-223ENST00000475146 SMR3AQ99954 134 aa20.84■□□□□ 0.93
CPNE1-223ENST00000475146 CDC42EP2O14613 210 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 IGHMP01871 453 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 PATE4P0C8F1 98 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 NR2C1P13056 603 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 RPL4P36578 427 aaKnown RBP20.83■□□□□ 0.93
CPNE1-223ENST00000475146 RPL27P61353 136 aaKnown RBP20.83■□□□□ 0.93
CPNE1-223ENST00000475146 HGFACQ04756 655 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 TMPRSS11FQ6ZWK6 438 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 OR52J3Q8NH60 311 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 SH3GL3Q99963 347 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 NDEL1Q9GZM8 345 aa20.83■□□□□ 0.93
CPNE1-223ENST00000475146 DENND2DQ9H6A0 471 aaPredicted RBP20.83■□□□□ 0.93
CPNE1-223ENST00000475146 ZNF346Q9UL40 294 aaKnown RBP20.83■□□□□ 0.93
CPNE1-223ENST00000475146 TRBV4-1A0A0J9YWV2 114 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 SLC2A10O95528 541 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 SEMG1P04279 462 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 ZNF14P17017 642 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-223ENST00000475146 CALB2P22676 271 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 SERPINF1P36955 418 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 NUDT6P53370 316 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 SPIBQ01892 262 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 FMODQ06828 376 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 RAB35Q15286 201 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 FAM205BPQ63HN1 556 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 NUP37Q8NFH4 326 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 FGFBP3Q8TAT2 258 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 NSMAFQ92636 917 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 RNF121Q9H920 327 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 KRCC1Q9NPI7 259 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-223ENST00000475146 FAM53CQ9NYF3 392 aa20.82■□□□□ 0.92
CPNE1-223ENST00000475146 ADAM21Q9UKJ8 722 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms