RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 TMEM255AQ5JRV8 349 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SLC25A25Q6KCM7 469 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 LEG1Q6P5S2 330 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 FAM199XQ6PEV8 388 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 OGFOD3Q6PK18 319 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 ATG4DQ86TL0 474 aaPredicted RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 SLC43A2Q8N370 569 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ELOA3Q8NG57 546 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ELMOD3Q96FG2 381 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 WBP1Q96G27 269 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 DERL3Q96Q80 235 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 LIN7BQ9HAP6 207 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SRA1Q9HD15 236 aaKnown RBP11.28□□□□□ -0.6
RNF220-211ENST00000474956 SLC22A11Q9NSA0 550 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 SESN1Q9Y6P5 492 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
RNF220-211ENST00000474956 IGKV3D-11A0A0A0MRZ8 115 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 TRIM77I1YAP6 450 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 PDCD5O14737 125 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 SULT1B1O43704 296 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 TMEM127O75204 238 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 NAGAP17050 411 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 SRMP19623 302 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 TACR3P29371 465 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 HSD11B2P80365 405 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 ODF4Q2M2E3 257 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 SNX33Q8WV41 574 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 FCAMRQ8WWV6 532 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 PIGKQ92643 395 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 TAAR8Q969N4 342 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.6
RNF220-211ENST00000474956 DPYSL5Q9BPU6 564 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 VN1R1Q9GZP7 353 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 NOX3Q9HBY0 568 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 MED9Q9NWA0 146 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 SDHAF2Q9NX18 166 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 PIPOXQ9P0Z9 390 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 SERTAD3Q9UJW9 196 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 FBXL3Q9UKT7 428 aa11.27□□□□□ -0.6
RNF220-211ENST00000474956 FREM3P0C091 2139 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 C11orf98E9PRG8 122 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 H0YIG0 161 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 GPRIN2O60269 458 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 KHDRBS3O75525 346 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 EDNRAP25101 427 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 ITPKBP27987 946 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 RBM34P42696 430 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 MAP2K6P52564 334 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 NANOS3P60323 173 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.27□□□□□ -0.61
RNF220-211ENST00000474956 ARHGAP40Q5TG30 622 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 ZNF574Q6ZN55 896 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 ZNF563Q8TA94 476 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 ZNF578Q96N58 590 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 CNN2Q99439 309 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 LPAR4Q99677 370 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 AIFM2Q9BRQ8 373 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 TMPRSS13Q9BYE2 586 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 SLC25A18Q9H1K4 315 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 GPN1Q9HCN4 374 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 UBQLN4Q9NRR5 601 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 HRH3Q9Y5N1 445 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 NUP210LQ5VU65 1888 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 FRYQ5TBA9 3013 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 SCDO00767 359 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 TSPAN4O14817 238 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 RPP14O95059 124 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 NUDT14O95848 222 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 CXCL2P19875 107 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 NFYAP23511 347 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 MRPS10P82664 201 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 EBPQ15125 230 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 ZNF74Q16587 644 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 LSM14AQ8ND56 463 aaKnown RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 GCDHQ92947 438 aaPredicted RBP11.27□□□□□ -0.61
RNF220-211ENST00000474956 LRFN5Q96NI6 719 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 SEC22CQ9BRL7 303 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 REG4Q9BYZ8 158 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 FGF21Q9NSA1 209 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 TAS2R5Q9NYW4 299 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
RNF220-211ENST00000474956 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
RNF220-211ENST00000474956 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
RNF220-211ENST00000474956 AIPO00170 330 aa11.26□□□□□ -0.61
RNF220-211ENST00000474956 ZNF264O43296 627 aa11.26□□□□□ -0.61
RNF220-211ENST00000474956 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
RNF220-211ENST00000474956 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
RNF220-211ENST00000474956 TSPAN9O75954 239 aa11.26□□□□□ -0.61
RNF220-211ENST00000474956 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms