RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SOAT1P35610 550 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ASCL1P50553 236 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RIPPLY3P57055 190 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RAB2AP61019 212 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PRR5P85299 388 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CDK5Q00535 292 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PLA2G2CQ5R387 149 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 LYPLAL1Q5VWZ2 237 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF770Q6IQ21 691 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PSAPL1Q6NUJ1 521 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TTLL10Q6ZVT0 673 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 OR2AP1Q8NGE2 309 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PPTC7Q8NI37 304 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 C2orf15Q8WU43 125 aaKnown RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 FAR1Q8WVX9 515 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM203Q969S6 136 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 DGAT2Q96PD7 388 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CPXM1Q96SM3 734 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RAB11FIP5Q9BXF6 653 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ARV1Q9H2C2 271 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 FAM124BQ9H5Z6 455 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PRDM6Q9NQX0 595 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SUSD2Q9UGT4 822 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 NXT1Q9UKK6 140 aaKnown RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ST3GAL6Q9Y274 331 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PTPRJQ12913 1337 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM72A0PK05 275 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 G3V3Y1 287 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 GTF2F2P13984 249 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 HSD17B1P14061 328 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 EN2P19622 333 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CSNK2A2P19784 350 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ACKR3P25106 362 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SLC10A1Q14973 349 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CST9Q5W186 159 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SLC8B1Q6J4K2 584 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TEX38Q6PEX7 206 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TSPAN33Q86UF1 283 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 WFDC3Q8IUB2 231 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 LAX1Q8IWV1 398 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RIMKLAQ8IXN7 391 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CMTM1Q8IZ96 169 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 LRRC57Q8N9N7 239 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CDRT4Q8N9R6 151 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 OR9K2Q8NGE7 335 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 OR2G2Q8NGZ5 317 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MYLIPQ8WY64 445 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 KAT5Q92993 513 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MOCOSQ96EN8 888 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RAX2Q96IS3 184 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 KREMEN1Q96MU8 473 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CCDC32Q9BV29 185 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 HRH4Q9H3N8 390 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 UBE2ZQ9H832 354 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MEAF6Q9HAF1 191 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 RAB9BQ9NP90 201 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TICRRQ7Z2Z1 1910 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1B0GV72 72 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1W2PR77 199 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 NPIPB13A6NJU9 1138 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 NPIPB4C9JG80 1138 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 SRFP11831 508 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 NFYBP25208 207 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 DLSTP36957 453 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 KIR2DL2P43627 348 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PAX9P55771 341 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 C2orf80Q0P641 193 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 DAG1Q14118 895 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 UGT8Q16880 541 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RNF151Q2KHN1 245 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PLPP4Q5VZY2 271 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 FIGNL1Q6PIW4 674 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF546Q86UE3 836 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TEX26Q8N6G2 289 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 ZSCAN4Q8NAM6 433 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 OR52L1Q8NGH7 329 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 OR1P1Q8NH06 330 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF519Q8TB69 540 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PTH2Q96A98 100 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 ZBTB45Q96K62 511 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RBM24Q9BX46 236 aaKnown RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 LRRC3Q9BY71 257 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RHOFQ9HBH0 211 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 NECAP2Q9NVZ3 263 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM181Q9P2C4 612 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PRSS50Q9UI38 385 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PPP1R3CQ9UQK1 317 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 Q9Y3F1 56 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 LRIT2A6NDA9 550 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 VAPBO95292 243 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 APOC3P02656 99 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 MT-ND4P03905 459 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PRNPP04156 253 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms