RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TMEM38BQ9NVV0 291 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 SONP18583 2426 aaKnown RBP15.53■□□□□ 0.08
UPF3A-203ENST00000474056 TRMUO75648 421 aaKnown RBP15.52■□□□□ 0.08
UPF3A-203ENST00000474056 LY6HO94772 140 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 UBL3O95164 117 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 RAB36O95755 333 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 OR4A8P0C604 315 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 BMP4P12644 408 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 ACADSP16219 412 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 MAKP20794 623 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 THBS4P35443 961 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SNRPD2P62316 118 aaKnown RBP15.52■□□□□ 0.08
UPF3A-203ENST00000474056 RAB1AP62820 205 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 TRAM2Q15035 370 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 KRT80Q6KB66 452 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 TSEN54Q7Z6J9 526 aaKnown RBP15.52■□□□□ 0.08
UPF3A-203ENST00000474056 NRMQ8IXM6 262 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SLC22A24Q8N4F4 322 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 RNF148Q8N7C7 305 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SYT14Q8NB59 555 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 OR10H5Q8NGA6 315 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SORCS2Q96PQ0 1159 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SEPHS2Q99611 448 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 RHNO1Q9BSD3 238 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF442Q9H7R0 627 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 SPAG4Q9NPE6 437 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 ADA2Q9NZK5 511 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 HIF3AQ9Y2N7 669 aa15.52■□□□□ 0.08
UPF3A-203ENST00000474056 ABCA2Q9BZC7 2435 aa15.52■□□□□ 0.07
UPF3A-203ENST00000474056 TRAV27A0A087WT01 109 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 A0A087WUU8 490 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 CENPBD1B2RD01 187 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 B9A039 149 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 DAP3P51398 398 aaKnown RBP15.51■□□□□ 0.07
UPF3A-203ENST00000474056 EFNA4P52798 201 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 SNTB2Q13425 540 aaKnown RBP15.51■□□□□ 0.07
UPF3A-203ENST00000474056 DAG1Q14118 895 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 RAB39AQ14964 217 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 EFNB3Q15768 340 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 ALG10Q5BKT4 473 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 ARMC4Q5T2S8 1044 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 GLYATQ6IB77 296 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 TBPL2Q6SJ96 375 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 CLEC2AQ6UVW9 174 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 HDDC2Q7Z4H3 204 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 FAM156AQ8NDB6 213 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 IL17RDQ8NFM7 739 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 HDAC2Q92769 488 aaKnown RBP15.51■□□□□ 0.07
UPF3A-203ENST00000474056 SH3GL3Q99963 347 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 PLK3Q9H4B4 646 aa15.51■□□□□ 0.07
UPF3A-203ENST00000474056 A0A096LNT2 108 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 SLC2A10O95528 541 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 OR8G3PP0DMU2 310 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 SAGP10523 405 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF35P13682 527 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 PRKCDQ05655 676 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 TOP3AQ13472 1001 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-203ENST00000474056 FHL1Q13642 323 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 IGFN1Q86VF2 1251 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF584Q8IVC4 421 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 LRRC75AQ8NAA5 344 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 OR4K5Q8NGD3 323 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ACOT11Q8WXI4 607 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-203ENST00000474056 VRK1Q99986 396 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-203ENST00000474056 TXNIPQ9H3M7 391 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 DENND2DQ9H6A0 471 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ARL8BQ9NVJ2 186 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 RPS6KA6Q9UK32 745 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ARL2BPQ9Y2Y0 163 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 ENPP4Q9Y6X5 453 aa15.5■□□□□ 0.07
UPF3A-203ENST00000474056 IGKV1D-43A0A0B4J1Z2 117 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 TMEM129A0AVI4 362 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 NPIPB13A6NJU9 1138 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 NPIPB4C9JG80 1138 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 INAFM1C9JVW0 142 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 hCG_2039718K7EN88 272 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 GPRIN2O60269 458 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 FARS2O95363 451 aaKnown RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 F12P00748 615 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 TCN1P20061 433 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 NPR2P20594 1047 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 NR4A1P22736 598 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 PCSK6P29122 969 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF84P51523 738 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF133P52736 654 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 DSCR9P59020 149 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 CTXN1P60606 82 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 FMODQ06828 376 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 MSMPQ1L6U9 139 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 C10orf128Q5T292 105 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF730Q6ZMV8 503 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 PIGWQ7Z7B1 504 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 FAM86B1Q8N7N1 296 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 ANKS4BQ8N8V4 417 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 OR13C2Q8NGS9 318 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 OR51A7Q8NH64 312 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 FAM168AQ92567 244 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 KCNK17Q96T54 332 aa15.49■□□□□ 0.07
UPF3A-203ENST00000474056 DCAF13Q9NV06 445 aaKnown RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 STX18Q9P2W9 335 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms