RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CD8AP01732 235 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 RRM2P31350 389 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 CAPZA2P47755 286 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 CTXN1P60606 82 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 FMODQ06828 376 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 TRIM25Q14258 630 aaKnown RBP16.47■□□□□ 0.23
PTCD3-210ENST00000473829 RRM2BQ7LG56 351 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 CDK20Q8IZL9 346 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 CLDN22Q8N7P3 220 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 FGFBP3Q8TAT2 258 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 MCUR1Q96AQ8 359 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 SLC7A6OSQ96CW6 309 aaPredicted RBP16.47■□□□□ 0.23
PTCD3-210ENST00000473829 NMD3Q96D46 503 aaKnown RBP16.47■□□□□ 0.23
PTCD3-210ENST00000473829 KCNK17Q96T54 332 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 THTPAQ9BU02 230 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 MUC13Q9H3R2 512 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 POU2F3Q9UKI9 436 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 TMEM5Q9Y2B1 443 aa16.47■□□□□ 0.23
PTCD3-210ENST00000473829 OVOL3O00110 214 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 SLC2A10O95528 541 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 CBR1P16152 277 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 CALCRP30988 508 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 PTH2RP49190 550 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 IDH3GP51553 393 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-210ENST00000473829 FXYD6P3P58550 94 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 RPL27P61353 136 aaKnown RBP16.46■□□□□ 0.23
PTCD3-210ENST00000473829 NKX6-1P78426 367 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-210ENST00000473829 NAAAQ02083 359 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 NPRL3Q12980 569 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 C3orf36Q3SXR2 165 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ANKDD1AQ495B1 522 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ZBED5Q49AG3 693 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 HDDC2Q7Z4H3 204 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 DHFR2Q86XF0 187 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 TGIF2LYQ8IUE0 185 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 SKA3Q8IX90 412 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 LRRC75A-AS1Q8N1F1 130 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 FAM169BQ8N8A8 192 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF519Q8TB69 540 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF75AQ96N20 296 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 TRAF4Q9BUZ4 470 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-210ENST00000473829 KATNB1Q9BVA0 655 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 GSX2Q9BZM3 304 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF701Q9NV72 531 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-210ENST00000473829 TMEM38BQ9NVV0 291 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ADAM18Q9Y3Q7 739 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 ATP23Q9Y6H3 246 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 MED13LQ71F56 2210 aa16.46■□□□□ 0.23
PTCD3-210ENST00000473829 CENPBD1B2RD01 187 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 ACOT8O14734 319 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 PTP4A3O75365 173 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 PATE4P0C8F1 98 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 CD79AP11912 226 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 CDKN1AP38936 164 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 MAGEA2P43356 314 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF133P52736 654 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-210ENST00000473829 ERVK-25P63136 954 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 PIGFQ07326 219 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 MTX3Q5HYI7 312 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 Q5PR19 223 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 THSD4Q6ZMP0 1018 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 PIWIL3Q7Z3Z3 882 aaKnown RBP16.45■□□□□ 0.22
PTCD3-210ENST00000473829 DTX2Q86UW9 622 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 SLC22A24Q8N4F4 322 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 ASB9Q96DX5 294 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 MS4A3Q96HJ5 214 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 RSRC1Q96IZ7 334 aaKnown RBP16.45■□□□□ 0.22
PTCD3-210ENST00000473829 SH3GL3Q99963 347 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 DHRS9Q9BPW9 319 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 CXorf56Q9H5V9 222 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 SIGLEC7Q9Y286 467 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 UGT2A1Q9Y4X1 527 aa16.45■□□□□ 0.22
PTCD3-210ENST00000473829 PAX1P15863 534 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 PAX7P23759 505 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 TTKP33981 857 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 ARR3P36575 388 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 ACVR1BP36896 505 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 SMIM11AP58511 58 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 CD47Q08722 323 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 TAF11Q15544 211 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 GSG1Q2KHT4 349 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 C10orf128Q5T292 105 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 C11orf71Q6IPW1 123 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 FAM122BQ7Z309 247 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 ZER1Q7Z7L7 766 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 CCDC36Q8IYA8 594 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 GTPBP3Q969Y2 492 aaKnown RBP16.44■□□□□ 0.22
PTCD3-210ENST00000473829 STX18Q9P2W9 335 aaKnown RBP16.44■□□□□ 0.22
PTCD3-210ENST00000473829 IL20RAQ9UHF4 553 aa16.44■□□□□ 0.22
PTCD3-210ENST00000473829 FLNAP21333 2647 aaKnown RBP16.43■□□□□ 0.22
PTCD3-210ENST00000473829 IGHV2OR16-5A0A0B4J2B6 119 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 H7C1C5 153 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 CRYAAP02489 173 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 CD14P08571 375 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF14P17017 642 aaPredicted RBP16.43■□□□□ 0.22
PTCD3-210ENST00000473829 RPL4P36578 427 aaKnown RBP16.43■□□□□ 0.22
PTCD3-210ENST00000473829 GIPRP48546 466 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 LCN6P62502 163 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 MESTQ5EB52 335 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms