RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PSME3P61289 254 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 S100A12P80511 92 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 BAMBIQ13145 260 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 IL18R1Q13478 541 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 PTGR1Q14914 329 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF141Q15928 474 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SWI5Q1ZZU3 235 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CR1LQ2VPA4 569 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CDONQ4KMG0 1287 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ATP6AP1LQ52LC2 224 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 FGD3Q5JSP0 725 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 KANK2Q63ZY3 851 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 VHLLQ6RSH7 139 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 RNF165Q6ZSG1 346 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 USP43Q70EL4 1123 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 GRINAQ7Z429 371 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ABHD12BQ7Z5M8 362 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SNX32Q86XE0 403 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 C10orf107Q8IVU9 208 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 FNDC5Q8NAU1 212 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 PSMA8Q8TAA3 256 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 AGR3Q8TD06 166 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SFXN5Q8TD22 340 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 HDAC2Q92769 488 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 DDIT4LQ96D03 193 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ARL5BQ96KC2 179 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SORCS2Q96PQ0 1159 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 HOPXQ9BPY8 73 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 NAA11Q9BSU3 229 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 BHLHE41Q9C0J9 482 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 BPESC1Q9GZL8 116 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 RAB1BQ9H0U4 201 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 MMP27Q9H306 513 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 TUBB1Q9H4B7 451 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 NANOGQ9H9S0 305 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CCNB1IP1Q9NPC3 277 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SPAG4Q9NPE6 437 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 C12orf4Q9NQ89 552 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 RPRD1BQ9NQG5 326 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SLC17A5Q9NRA2 495 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CTPS2Q9NRF8 586 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CA10Q9NS85 328 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 DDX28Q9NUL7 540 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ADA2Q9NZK5 511 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 TMEM181Q9P2C4 612 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 MARCOQ9UEW3 520 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 TMEFF2Q9UIK5 374 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 PCDHGB4Q9UN71 923 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SLC35A3Q9Y2D2 325 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ROS1P08922 2347 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 LOC100653049A0A140TA62 436 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 LRP5LA4QPB2 252 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ZSCAN5BA6NJL1 495 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 B9A039 149 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 J3QRK9 145 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 TRIM13O60858 407 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 UPK1BO75841 260 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 KRT34O76011 436 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 OR4A8P0C604 315 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF182P17025 639 aaPredicted RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 PRPS1L1P21108 318 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 PCMT1P22061 227 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 MPGP29372 298 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ERP29P30040 261 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 NTF4P34130 210 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 DDOSTP39656 456 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 OPRL1P41146 370 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 SLC1A3P43003 542 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 HTR3AP46098 478 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 RPS5P46782 204 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 IDH2P48735 452 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 RPL14P50914 215 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 FOXG1P55316 489 aaPredicted RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 UBE2NP61088 152 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 COPZ1P61923 177 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 HBA1P69905 142 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 SLC35A1P78382 337 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 PMS2P3Q13401 168 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ATP6AP1Q15904 470 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 FXNQ16595 210 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 PGS1Q32NB8 556 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 RFX4Q33E94 735 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ARHGAP11BQ3KRB8 267 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 MTX3Q5HYI7 312 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 TSPO2Q5TGU0 170 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 RFPL4BQ6ZWI9 263 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 C6orf120Q7Z4R8 191 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 MEX3DQ86XN8 651 aaKnown RBP6.03□□□□□ -1.44
CKS1B-205ENST00000473344 POMGNT2Q8NAT1 580 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF555Q8NEP9 628 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 VPS37AQ8NEZ2 397 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 RHOXF1Q8NHV9 184 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 OIT3Q8WWZ8 545 aa6.03□□□□□ -1.44
CKS1B-205ENST00000473344 PMM1Q92871 262 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms