RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 KRT72Q14CN4 511 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 LAPTM4AQ15012 233 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 EFNB3Q15768 340 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 SWI5Q1ZZU3 235 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 LRFN4Q6PJG9 635 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 SLC16A14Q7RTX9 510 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 RNF113BQ8IZP6 322 aaKnown RBP16.86■□□□□ 0.29
COMMD1-208ENST00000472729 OFCC1Q8IZS5 231 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 LIPHQ8WWY8 451 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 MCHR2Q969V1 340 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 LRRC37BQ96QE4 947 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 MYLK2Q9H1R3 596 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 SEC61A2Q9H9S3 476 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 NOX3Q9HBY0 568 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 KRCC1Q9NPI7 259 aaPredicted RBP16.86■□□□□ 0.29
COMMD1-208ENST00000472729 TMEM38BQ9NVV0 291 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 B3GNT2Q9NY97 397 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 SAMD4AQ9UPU9 718 aaKnown RBP16.86■□□□□ 0.29
COMMD1-208ENST00000472729 CMAHPQ9Y471 501 aa16.86■□□□□ 0.29
COMMD1-208ENST00000472729 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 hCG_2039718K7EN88 272 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 DCTN3O75935 186 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 SLC25A16P16260 332 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 NCK1P16333 377 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 DRD4P21917 467 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 MYBPC1Q00872 1141 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 CD47Q08722 323 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 TOP3AQ13472 1001 aaPredicted RBP16.85■□□□□ 0.29
COMMD1-208ENST00000472729 GLYATQ6IB77 296 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 SKA3Q8IX90 412 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 NOXO1Q8NFA2 376 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 MOSPD2Q8NHP6 518 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 ACOT11Q8WXI4 607 aaPredicted RBP16.85■□□□□ 0.29
COMMD1-208ENST00000472729 MS4A3Q96HJ5 214 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 RBP7Q96R05 134 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF347Q96SE7 839 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 LRMDAQ9H2I8 198 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 GMPR2Q9P2T1 348 aaKnown RBP16.85■□□□□ 0.29
COMMD1-208ENST00000472729 EGFL7Q9UHF1 273 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 ARL2BPQ9Y2Y0 163 aa16.85■□□□□ 0.29
COMMD1-208ENST00000472729 CADP27708 2225 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 IQCMA0A1B0GVH7 501 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 SH3PXD2BA1X283 911 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 ZNF503-AS2A6NEH8 195 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 J3KTA2 159 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 MGRN1O60291 552 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 PIP5K1CO60331 668 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 TRMUO75648 421 aaKnown RBP16.84■□□□□ 0.29
COMMD1-208ENST00000472729 HOXB4P17483 251 aaPredicted RBP16.84■□□□□ 0.29
COMMD1-208ENST00000472729 NR4A1P22736 598 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 RPL4P36578 427 aaKnown RBP16.84■□□□□ 0.29
COMMD1-208ENST00000472729 PDLIM4P50479 330 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 SELENOVP59797 346 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 HGFACQ04756 655 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 MST1LQ2TV78 715 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 ANKDD1AQ495B1 522 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 NRN1LQ496H8 165 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
COMMD1-208ENST00000472729 OR4K5Q8NGD3 323 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 OR51A7Q8NH64 312 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 FNDC8Q8TC99 324 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 ASB10Q8WXI3 467 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 SH3GL3Q99963 347 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 C1orf198Q9H425 327 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 MYOZ1Q9NP98 299 aaPredicted RBP16.84■□□□□ 0.29
COMMD1-208ENST00000472729 CCNB1IP1Q9NPC3 277 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 NDE1Q9NXR1 346 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 SNX13Q9Y5W8 968 aa16.84■□□□□ 0.29
COMMD1-208ENST00000472729 IGHV4-30-2A0A087WSY4 118 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 SLC22A23A1A5C7 686 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 SERPINA5P05154 406 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 ITGA2P17301 1181 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 TCN1P20061 433 aaPredicted RBP16.83■□□□□ 0.28
COMMD1-208ENST00000472729 SLC9A3P48764 834 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 CTXN1P60606 82 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 HSF2Q03933 536 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 RAB39AQ14964 217 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 FAM205BPQ63HN1 556 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 MYPOPQ86VE0 399 aaPredicted RBP16.83■□□□□ 0.28
COMMD1-208ENST00000472729 WDFY1Q8IWB7 410 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 SVOPLQ8N434 492 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 OR10H5Q8NGA6 315 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 OR1J2Q8NGS2 313 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 MCUR1Q96AQ8 359 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 ZNF469Q96JG9 3925 aaPredicted RBP16.83■□□□□ 0.28
COMMD1-208ENST00000472729 PIMREGQ9BSJ6 248 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 TXNIPQ9H3M7 391 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 ANKRD19PQ9H560 264 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 CDH20Q9HBT6 801 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 ABCD2Q9UBJ2 740 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 TMEM5Q9Y2B1 443 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 HIF3AQ9Y2N7 669 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 ENPP4Q9Y6X5 453 aa16.83■□□□□ 0.28
COMMD1-208ENST00000472729 VPS13CQ709C8 3753 aa16.82■□□□□ 0.28
COMMD1-208ENST00000472729 ZFHX3Q15911 3703 aa16.82■□□□□ 0.28
COMMD1-208ENST00000472729 A6NIZ1 184 aa16.82■□□□□ 0.28
COMMD1-208ENST00000472729 NPIPB13A6NJU9 1138 aa16.82■□□□□ 0.28
COMMD1-208ENST00000472729 NPIPB4C9JG80 1138 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms